RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 RHOT2Q8IXI1 618 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 RAET1EQ8TD07 263 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 LPIN3Q9BQK8 851 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 ELOVL4Q9GZR5 314 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 GTF3C4Q9UKN8 822 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 MRPS6P82932 125 aaKnown RBP13.43□□□□□ -0.26
CLCN6-206ENST00000376496 DENND1BQ6P3S1 775 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 WHAMMQ8TF30 809 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 HES6Q96HZ4 224 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 ZFP42Q96MM3 310 aa13.43□□□□□ -0.26
CLCN6-206ENST00000376496 ATP8B3O60423 1300 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 DDX3YO15523 660 aaKnown RBP13.42□□□□□ -0.26
CLCN6-206ENST00000376496 THPOP40225 353 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 AFF1P51825 1210 aaKnown RBP13.42□□□□□ -0.26
CLCN6-206ENST00000376496 YARSP54577 528 aaKnown RBP13.42□□□□□ -0.26
CLCN6-206ENST00000376496 RAD23BP54727 409 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 CFAP221Q4G0U5 840 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 MON1BQ7L1V2 547 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 KLHL7Q8IXQ5 586 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 SYCE1Q8N0S2 351 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 SMG8Q8ND04 991 aaKnown RBP13.42□□□□□ -0.26
CLCN6-206ENST00000376496 ADAM22Q9P0K1 906 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 ANAPC7Q9UJX3 599 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 IPPQ9Y573 584 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 ITGA4P13612 1032 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 CENPCQ03188 943 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 SOX4Q06945 474 aaPredicted RBP13.42□□□□□ -0.26
CLCN6-206ENST00000376496 CYP4A22Q5TCH4 519 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 WDTC1Q8N5D0 677 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 ZNF784Q8NCA9 323 aaPredicted RBP13.42□□□□□ -0.26
CLCN6-206ENST00000376496 LPPQ93052 612 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 BCO2Q9BYV7 579 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 AGO3Q9H9G7 860 aaKnown RBP13.42□□□□□ -0.26
CLCN6-206ENST00000376496 ST3GAL5Q9UNP4 418 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 C2CD2Q9Y426 696 aa13.42□□□□□ -0.26
CLCN6-206ENST00000376496 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
CLCN6-206ENST00000376496 CDC42EP1Q00587 391 aa13.41□□□□□ -0.26
CLCN6-206ENST00000376496 PTGISQ16647 500 aa13.41□□□□□ -0.26
CLCN6-206ENST00000376496 ZNF677Q86XU0 584 aa13.41□□□□□ -0.26
CLCN6-206ENST00000376496 GDAP1L1Q96MZ0 367 aa13.41□□□□□ -0.26
CLCN6-206ENST00000376496 DMGDHQ9UI17 866 aaKnown RBP13.41□□□□□ -0.26
CLCN6-206ENST00000376496 NR2E1Q9Y466 385 aa13.41□□□□□ -0.26
CLCN6-206ENST00000376496 SNX9Q9Y5X1 595 aa13.41□□□□□ -0.26
CLCN6-206ENST00000376496 ZSCAN5CA6NGD5 496 aaPredicted RBP13.41□□□□□ -0.26
CLCN6-206ENST00000376496 PIK3R2O00459 728 aa13.41□□□□□ -0.26
CLCN6-206ENST00000376496 RPS6KA5O75582 802 aa13.41□□□□□ -0.26
CLCN6-206ENST00000376496 RBP5P82980 135 aa13.41□□□□□ -0.26
CLCN6-206ENST00000376496 CCSAPQ6IQ19 270 aaPredicted RBP13.41□□□□□ -0.26
CLCN6-206ENST00000376496 TAF2Q6P1X5 1199 aa13.41□□□□□ -0.26
CLCN6-206ENST00000376496 SLC4A11Q8NBS3 891 aa13.41□□□□□ -0.26
CLCN6-206ENST00000376496 MSANTD4Q8NCY6 345 aa13.41□□□□□ -0.26
CLCN6-206ENST00000376496 KLHDC9Q8NEP7 349 aa13.41□□□□□ -0.26
CLCN6-206ENST00000376496 CYTH4Q9UIA0 394 aa13.41□□□□□ -0.26
CLCN6-206ENST00000376496 SMIM28A0A1B0GU29 152 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 O00370 1275 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 KPNA6O60684 536 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 HMGCRP04035 888 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 GHRP10912 638 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 SERINC5Q86VE9 423 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 C12orf29Q8N999 325 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 KRT12Q99456 494 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 MRPL45Q9BRJ2 306 aaKnown RBP13.4□□□□□ -0.26
CLCN6-206ENST00000376496 DDX20Q9UHI6 824 aaKnown RBP13.4□□□□□ -0.26
CLCN6-206ENST00000376496 ITGA11Q9UKX5 1188 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 NME7Q9Y5B8 376 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 M0QZ92 97 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 SPOPO43791 374 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 NDST1P52848 882 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 TNNC1P63316 161 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 PTP4A2Q12974 167 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 USP38Q8NB14 1042 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 RNF169Q8NCN4 708 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 UBA3Q8TBC4 463 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 ZNF296Q8WUU4 475 aaPredicted RBP13.4□□□□□ -0.26
CLCN6-206ENST00000376496 TRPV2Q9Y5S1 764 aa13.4□□□□□ -0.26
CLCN6-206ENST00000376496 SPTLC1O15269 473 aa13.4□□□□□ -0.27
CLCN6-206ENST00000376496 INHAP05111 366 aa13.4□□□□□ -0.27
CLCN6-206ENST00000376496 MYBL2P10244 700 aa13.4□□□□□ -0.27
CLCN6-206ENST00000376496 CD52P31358 61 aa13.4□□□□□ -0.27
CLCN6-206ENST00000376496 RPL7AP62424 266 aaKnown RBP13.4□□□□□ -0.27
CLCN6-206ENST00000376496 ZBTB6Q15916 424 aa13.4□□□□□ -0.27
CLCN6-206ENST00000376496 KYAT1Q16773 422 aa13.4□□□□□ -0.27
CLCN6-206ENST00000376496 ZNF618Q5T7W0 954 aa13.4□□□□□ -0.27
CLCN6-206ENST00000376496 CC2D1AQ6P1N0 951 aaPredicted RBP13.4□□□□□ -0.27
CLCN6-206ENST00000376496 ALKAL1Q6UXT8 129 aa13.4□□□□□ -0.27
CLCN6-206ENST00000376496 NME8Q8N427 588 aa13.4□□□□□ -0.27
CLCN6-206ENST00000376496 HEXIM2Q96MH2 286 aaKnown RBP13.4□□□□□ -0.27
CLCN6-206ENST00000376496 USTQ9Y2C2 406 aa13.4□□□□□ -0.27
CLCN6-206ENST00000376496 CASP8AP2Q9UKL3 1982 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 ESYT3A0FGR9 886 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 CILPO75339 1184 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 FGGP02679 453 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 GJC1P36383 396 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 ITGA7Q13683 1181 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 SENP6Q9GZR1 1112 aaPredicted RBP13.39□□□□□ -0.27
CLCN6-206ENST00000376496 THSD7BQ9C0I4 1608 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 GOLGA8SH3BPF8 625 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 ACLYP53396 1101 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 HADHBP55084 474 aaKnown RBP13.39□□□□□ -0.27
CLCN6-206ENST00000376496 MAMLD1Q13495 774 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms