RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 ATF7IP2Q5U623 682 aa11.52□□□□□ -0.56
MDC1-201ENST00000376406 JAMLQ86YT9 394 aa11.52□□□□□ -0.56
MDC1-201ENST00000376406 HOMEZQ8IX15 550 aa11.52□□□□□ -0.56
MDC1-201ENST00000376406 RBBP8NLQ8NC74 664 aaPredicted RBP11.52□□□□□ -0.56
MDC1-201ENST00000376406 SEPT8Q92599 483 aa11.52□□□□□ -0.56
MDC1-201ENST00000376406 TMEM143Q96AN5 459 aa11.52□□□□□ -0.56
MDC1-201ENST00000376406 MTG1Q9BT17 334 aaPredicted RBP11.52□□□□□ -0.56
MDC1-201ENST00000376406 ETNK1Q9HBU6 452 aa11.52□□□□□ -0.56
MDC1-201ENST00000376406 NEU2Q9Y3R4 380 aa11.52□□□□□ -0.56
MDC1-201ENST00000376406 PCDHB2Q9Y5E7 798 aa11.52□□□□□ -0.56
MDC1-201ENST00000376406 CDH16O75309 829 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 CCDC138Q96M89 665 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 UNC45AQ9H3U1 944 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 TMX2Q9Y320 296 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 PCDHB12Q9Y5F1 795 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 CABYRO75952 493 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 SULT1E1P49888 294 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 GTF2H3Q13889 308 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 TBCCQ15814 346 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 ANKMY2Q8IV38 441 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 UCMAQ8WVF2 138 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 L3MBTL1Q9Y468 752 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 MYH3P11055 1940 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 DIAPH2O60879 1101 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 MCF2P10911 925 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 COMTP21964 271 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 PON1P27169 355 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 E2F4Q16254 413 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 LONRF1Q17RB8 773 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 FIGNQ5HY92 759 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 RGS9BPQ6ZS82 235 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 RBM15Q96T37 977 aaKnown RBP eCLIP11.52□□□□□ -0.579e-7■■■□□ 16.5
MDC1-201ENST00000376406 KLHL11Q9NVR0 708 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 WDR93Q6P2C0 686 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 TTC30AQ86WT1 665 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 ERP44Q9BS26 406 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 KBTBD4Q9NVX7 518 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 BFARQ9NZS9 450 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 SLC4A7Q9Y6M7 1214 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 SLIT3O75094 1523 aa11.52□□□□□ -0.57
MDC1-201ENST00000376406 MTSS1O43312 755 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 GARTP22102 1010 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 RAB27AP51159 221 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 ZNF235Q14590 738 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 SEC23AQ15436 765 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 ZIM3Q96PE6 472 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 RRAGCQ9HB90 399 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 MYH11P35749 1972 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 CSPG5O95196 566 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 WWP1Q9H0M0 922 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 PLAGL2Q9UPG8 496 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 PI4K2BG5E9Z4 385 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 MSH4O15457 936 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 PPFIA2O75334 1257 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 PDCD2Q16342 344 aaPredicted RBP11.51□□□□□ -0.57
MDC1-201ENST00000376406 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.51□□□□□ -0.57
MDC1-201ENST00000376406 NT5C1AQ9BXI3 368 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 CATSPERBQ9H7T0 1116 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 RALBP11234 206 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 LSP1P33241 339 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 HARS2P49590 506 aaKnown RBP11.51□□□□□ -0.57
MDC1-201ENST00000376406 EFTUD2Q15029 972 aaKnown RBP eCLIP11.51□□□□□ -0.571e-6■■■■□ 20.9
MDC1-201ENST00000376406 NT5DC1Q5TFE4 455 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 C4orf22Q6V702 233 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 SGSM3Q96HU1 749 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 TBX20Q9UMR3 447 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 USP15Q9Y4E8 981 aaPredicted RBP11.51□□□□□ -0.57
MDC1-201ENST00000376406 GOLGA4Q13439 2230 aaKnown RBP11.51□□□□□ -0.57
MDC1-201ENST00000376406 H0Y3Z8 333 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 NSUN2Q08J23 767 aaKnown RBP eCLIP11.51□□□□□ -0.57
MDC1-201ENST00000376406 ACCSLQ4AC99 568 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 RNF168Q8IYW5 571 aaPredicted RBP11.51□□□□□ -0.57
MDC1-201ENST00000376406 SH2D3CQ8N5H7 860 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 YME1L1Q96TA2 773 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 KCNH7Q9NS40 1196 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 IPPQ9Y573 584 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 FAM47DPA6NHR8 397 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 PSTPIP1O43586 416 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 SPAG6O75602 509 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 NPEPPSP55786 919 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 NOGQ13253 232 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 SEC16BQ96JE7 1060 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 MRPL46Q9H2W6 279 aaKnown RBP11.51□□□□□ -0.57
MDC1-201ENST00000376406 STARD7Q9NQZ5 370 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 KIAA1257Q9ULG3 409 aa11.51□□□□□ -0.57
MDC1-201ENST00000376406 EEF1B2P24534 225 aaKnown RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 KLRK1P26718 216 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 GTF2H1P32780 548 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 NTRK3Q16288 839 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 WDR72Q3MJ13 1102 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 TMTC4Q5T4D3 741 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 NOA1Q8NC60 698 aaKnown RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 PPHLN1Q8NEY8 458 aaKnown RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 MAF1Q9H063 256 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 OLFML3Q9NRN5 406 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 KLRC1P26715 233 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 MORF4L2Q15014 288 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 PLA2G4FQ68DD2 849 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 MTHFD1LQ6UB35 978 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 SMIM5Q71RC9 77 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms