RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.31□□□□□ -0.12
C9orf47-203ENST00000375851 ZNF189O75820 626 aaPredicted RBP14.3□□□□□ -0.12
C9orf47-203ENST00000375851 RHBDL3P58872 404 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 HERVK_113P62684 666 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 FASTKD1Q53R41 847 aaKnown RBP14.3□□□□□ -0.12
C9orf47-203ENST00000375851 HABP4Q5JVS0 413 aaKnown RBP14.3□□□□□ -0.12
C9orf47-203ENST00000375851 GLB1LQ6UWU2 654 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 SV2AQ7L0J3 742 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 SMG5Q9UPR3 1016 aaKnown RBP14.3□□□□□ -0.12
C9orf47-203ENST00000375851 UBA6A0AVT1 1052 aaPredicted RBP14.3□□□□□ -0.12
C9orf47-203ENST00000375851 GZMAP12544 262 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 CHN1P15882 459 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 MAGEA4P43358 317 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 GOLGA7BQ2TAP0 167 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 GLRA4Q5JXX5 417 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 ZNF571Q7Z3V5 609 aaPredicted RBP14.3□□□□□ -0.12
C9orf47-203ENST00000375851 FBXO16Q8IX29 292 aaPredicted RBP14.3□□□□□ -0.12
C9orf47-203ENST00000375851 C4orf33Q8N1A6 199 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 CCT8L2Q96SF2 557 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 PNKPQ96T60 521 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 BLOC1S4Q9NUP1 217 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 PAK5Q9P286 719 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 CHMP2BQ9UQN3 213 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 F8VZ95 297 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 SLITRK3O94933 977 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 CENPCQ03188 943 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 MYBPC2Q14324 1141 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 OTOP1Q7RTM1 612 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 DDX27Q96GQ7 796 aaKnown RBP14.3□□□□□ -0.12
C9orf47-203ENST00000375851 ZC3H11AO75152 810 aaKnown RBP eCLIP14.3□□□□□ -0.12
C9orf47-203ENST00000375851 VEGFAP15692 232 aaPredicted RBP14.3□□□□□ -0.12
C9orf47-203ENST00000375851 PRLRP16471 622 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 NNMTP40261 264 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 TAF6P49848 677 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 EFHC1Q5JVL4 640 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 ASIC4Q96FT7 647 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 PRMT1Q99873 361 aaKnown RBP14.3□□□□□ -0.12
C9orf47-203ENST00000375851 SMYD3Q9H7B4 428 aa14.3□□□□□ -0.12
C9orf47-203ENST00000375851 NOP53Q9NZM5 478 aaKnown RBP14.3□□□□□ -0.12
C9orf47-203ENST00000375851 UBQLN1Q9UMX0 589 aaKnown RBP14.3□□□□□ -0.12
C9orf47-203ENST00000375851 SLC29A2Q14542 456 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 PGM5Q15124 567 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 BOLA3Q53S33 107 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 ZNF484Q5JVG2 852 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 PAPD7Q5XG87 772 aaKnown RBP14.29□□□□□ -0.12
C9orf47-203ENST00000375851 GANCQ8TET4 914 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 DUSP9Q99956 384 aaKnown RBP14.29□□□□□ -0.12
C9orf47-203ENST00000375851 FER1L4A9Z1Z3 1794 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 GTPBP10A4D1E9 387 aaKnown RBP14.29□□□□□ -0.12
C9orf47-203ENST00000375851 E5RI56 91 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 EEF2KO00418 725 aaKnown RBP14.29□□□□□ -0.12
C9orf47-203ENST00000375851 MORF4L2Q15014 288 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 E2F4Q16254 413 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 MPZL3Q6UWV2 235 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 USP33Q8TEY7 942 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 ACSF2Q96CM8 615 aaPredicted RBP14.29□□□□□ -0.12
C9orf47-203ENST00000375851 CLMNQ96JQ2 1002 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 EPN3Q9H201 632 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 DPP3Q9NY33 737 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 KLK14Q9P0G3 267 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 TRIM33Q9UPN9 1127 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 TRAF3IP3Q9Y228 551 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 GTF2A2P52657 109 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 SOX10P56693 466 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 C3orf62Q6ZUJ4 267 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 SPATA21Q7Z572 469 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 SLC7A14Q8TBB6 771 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 GAKO14976 1311 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 TRPA1O75762 1119 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 VIL1P09327 827 aaKnown RBP14.29□□□□□ -0.12
C9orf47-203ENST00000375851 DSG3P32926 999 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 RFC1P35251 1148 aaPredicted RBP14.29□□□□□ -0.12
C9orf47-203ENST00000375851 CPT1AP50416 773 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 MAPK7Q13164 816 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 ACCSLQ4AC99 568 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 TMEM119Q4V9L6 283 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 HSP90AA5PQ58FG0 334 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 C9orf131Q5VYM1 1079 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 MTHFD1LQ6UB35 978 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 ZNF507Q8TCN5 953 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 ZBTB18Q99592 522 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 SPATC1LQ9H0A9 340 aa14.29□□□□□ -0.12
C9orf47-203ENST00000375851 PSMC3IPQ9P2W1 217 aaPredicted RBP14.29□□□□□ -0.12
C9orf47-203ENST00000375851 CCDC78A2IDD5 438 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 RRM1P23921 792 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 PEX19P40855 299 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 FNTAP49354 379 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 AGBL2Q5U5Z8 902 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 ULK4Q96C45 1275 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 OSGEPQ9NPF4 335 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 TTC36A6NLP5 189 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 VWA5AO00534 786 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 NEMP1O14524 444 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 CHUKO15111 745 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 EIF3HO15372 352 aaKnown RBP eCLIP14.28□□□□□ -0.12
C9orf47-203ENST00000375851 PNPLA4P41247 253 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 ZNF200P98182 395 aaPredicted RBP14.28□□□□□ -0.12
C9orf47-203ENST00000375851 CYP24A1Q07973 514 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 ORC1Q13415 861 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms