RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 PAK1Q13153 545 aa18.79■□□□□ 0.6
C6orf48-207ENST00000375642 CLUL1Q15846 466 aa18.79■□□□□ 0.6
C6orf48-207ENST00000375642 CTXN3Q4LDR2 81 aa18.79■□□□□ 0.6
C6orf48-207ENST00000375642 SCARA3Q6AZY7 606 aa18.79■□□□□ 0.6
C6orf48-207ENST00000375642 ANKRD54Q6NXT1 300 aa18.79■□□□□ 0.6
C6orf48-207ENST00000375642 ELMSAN1Q6PJG2 1045 aa18.79■□□□□ 0.6
C6orf48-207ENST00000375642 MLKLQ8NB16 471 aa18.79■□□□□ 0.6
C6orf48-207ENST00000375642 BORCS6Q96GS4 357 aa18.79■□□□□ 0.6
C6orf48-207ENST00000375642 HPDLQ96IR7 371 aa18.79■□□□□ 0.6
C6orf48-207ENST00000375642 DZANK1Q9NVP4 752 aa18.79■□□□□ 0.6
C6orf48-207ENST00000375642 DPP7Q9UHL4 492 aa18.79■□□□□ 0.6
C6orf48-207ENST00000375642 CD207Q9UJ71 328 aa18.79■□□□□ 0.6
C6orf48-207ENST00000375642 DSEQ9UL01 958 aa18.79■□□□□ 0.6
C6orf48-207ENST00000375642 CDY1Q9Y6F8 540 aa18.79■□□□□ 0.6
C6orf48-207ENST00000375642 SLC16A3O15427 465 aaKnown RBP18.78■□□□□ 0.6
C6orf48-207ENST00000375642 ADAM12O43184 909 aa18.78■□□□□ 0.6
C6orf48-207ENST00000375642 TGM5O43548 720 aa18.78■□□□□ 0.6
C6orf48-207ENST00000375642 OAZ2O95190 189 aa18.78■□□□□ 0.6
C6orf48-207ENST00000375642 ENPEPQ07075 957 aa18.78■□□□□ 0.6
C6orf48-207ENST00000375642 BIRC3Q13489 604 aa18.78■□□□□ 0.6
C6orf48-207ENST00000375642 TRPC3Q13507 836 aa18.78■□□□□ 0.6
C6orf48-207ENST00000375642 ZNF280DQ6N043 979 aa18.78■□□□□ 0.6
C6orf48-207ENST00000375642 TTI2Q6NXR4 508 aa18.78■□□□□ 0.6
C6orf48-207ENST00000375642 FOXR2Q6PJQ5 311 aa18.78■□□□□ 0.6
C6orf48-207ENST00000375642 METTL23Q86XA0 190 aa18.78■□□□□ 0.6
C6orf48-207ENST00000375642 ZC3H3Q8IXZ2 948 aaKnown RBP18.78■□□□□ 0.6
C6orf48-207ENST00000375642 MSLNLQ96KJ4 702 aa18.78■□□□□ 0.6
C6orf48-207ENST00000375642 OXCT2Q9BYC2 517 aaPredicted RBP18.78■□□□□ 0.6
C6orf48-207ENST00000375642 C11orf16Q9NQ32 467 aa18.78■□□□□ 0.6
C6orf48-207ENST00000375642 FBXL5Q9UKA1 691 aa18.78■□□□□ 0.6
C6orf48-207ENST00000375642 SPDYE4A6NLX3 237 aa18.77■□□□□ 0.6
C6orf48-207ENST00000375642 TBC1D4O60343 1298 aa18.77■□□□□ 0.6
C6orf48-207ENST00000375642 CST3P01034 146 aaPredicted RBP18.77■□□□□ 0.6
C6orf48-207ENST00000375642 CYP11A1P05108 521 aa18.77■□□□□ 0.6
C6orf48-207ENST00000375642 SPATA31D3P0C874 917 aa18.77■□□□□ 0.6
C6orf48-207ENST00000375642 STX17P56962 302 aa18.77■□□□□ 0.6
C6orf48-207ENST00000375642 RAB33AQ14088 237 aa18.77■□□□□ 0.6
C6orf48-207ENST00000375642 PUS10Q3MIT2 529 aaKnown RBP18.77■□□□□ 0.6
C6orf48-207ENST00000375642 OVOS1Q6IE37 1185 aa18.77■□□□□ 0.6
C6orf48-207ENST00000375642 SLC8B1Q6J4K2 584 aa18.77■□□□□ 0.6
C6orf48-207ENST00000375642 LILRA6Q6PI73 481 aa18.77■□□□□ 0.6
C6orf48-207ENST00000375642 RSPO2Q6UXX9 243 aaPredicted RBP18.77■□□□□ 0.6
C6orf48-207ENST00000375642 SPATA31D4Q6ZUB0 917 aa18.77■□□□□ 0.6
C6orf48-207ENST00000375642 CEP63Q96MT8 703 aa18.77■□□□□ 0.6
C6orf48-207ENST00000375642 DUSP9Q99956 384 aaKnown RBP18.77■□□□□ 0.6
C6orf48-207ENST00000375642 GDAP2Q9NXN4 497 aa18.77■□□□□ 0.6
C6orf48-207ENST00000375642 PRR33A8MZF0 331 aa18.76■□□□□ 0.59
C6orf48-207ENST00000375642 PI4K2BG5E9Z4 385 aa18.76■□□□□ 0.59
C6orf48-207ENST00000375642 HUS1O60921 280 aa18.76■□□□□ 0.59
C6orf48-207ENST00000375642 C4BPAP04003 597 aaKnown RBP18.76■□□□□ 0.59
C6orf48-207ENST00000375642 TRIM49P0CI25 452 aa18.76■□□□□ 0.59
C6orf48-207ENST00000375642 TRIM49CP0CI26 452 aa18.76■□□□□ 0.59
C6orf48-207ENST00000375642 ARPP19P56211 112 aa18.76■□□□□ 0.59
C6orf48-207ENST00000375642 TDRD10Q5VZ19 366 aaKnown RBP18.76■□□□□ 0.59
C6orf48-207ENST00000375642 PTCRAQ6ISU1 281 aaPredicted RBP18.76■□□□□ 0.59
C6orf48-207ENST00000375642 SYCE2Q6PIF2 218 aa18.76■□□□□ 0.59
C6orf48-207ENST00000375642 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.76■□□□□ 0.59
C6orf48-207ENST00000375642 HDAC7Q8WUI4 952 aa18.76■□□□□ 0.59
C6orf48-207ENST00000375642 KHSRPQ92945 711 aaKnown RBP eCLIP18.76■□□□□ 0.597e-13■■□□□ 12.8
C6orf48-207ENST00000375642 PLEKHA4Q9H4M7 779 aa18.76■□□□□ 0.59
C6orf48-207ENST00000375642 MAN1C1Q9NR34 630 aa18.76■□□□□ 0.59
C6orf48-207ENST00000375642 RWDD2AQ9UIY3 292 aa18.76■□□□□ 0.59
C6orf48-207ENST00000375642 SNX9Q9Y5X1 595 aa18.76■□□□□ 0.59
C6orf48-207ENST00000375642 MUC6Q6W4X9 2439 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 VWA8A3KMH1 1905 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 SCN1AP35498 2009 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 OR6C75A6NL08 312 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 STX10O60499 249 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 ATICP31939 592 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 NLRP12P59046 1061 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 MCCD1P59942 119 aaPredicted RBP18.75■□□□□ 0.59
C6orf48-207ENST00000375642 SMAD4Q13485 552 aaKnown RBP18.75■□□□□ 0.59
C6orf48-207ENST00000375642 NCOA4Q13772 614 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 ZACNQ401N2 412 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 C1orf220Q5T0J3 134 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 CCDC183Q5T5S1 534 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 WSCD1Q658N2 575 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 SV2AQ7L0J3 742 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 FILIP1Q7Z7B0 1213 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 THEM5Q8N1Q8 247 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 C12orf76Q8N812 135 aaPredicted RBP18.75■□□□□ 0.59
C6orf48-207ENST00000375642 SMRP1Q8NCR6 262 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 KREMEN2Q8NCW0 462 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 SYAP1Q96A49 352 aaPredicted RBP18.75■□□□□ 0.59
C6orf48-207ENST00000375642 APOL5Q9BWW9 433 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 ARMCX3Q9UH62 379 aaPredicted RBP18.75■□□□□ 0.59
C6orf48-207ENST00000375642 DACH1Q9UI36 760 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 FAM50BQ9Y247 325 aa18.75■□□□□ 0.59
C6orf48-207ENST00000375642 GRXCR2A6NFK2 248 aa18.74■□□□□ 0.59
C6orf48-207ENST00000375642 SSTR3P32745 418 aaPredicted RBP18.74■□□□□ 0.59
C6orf48-207ENST00000375642 GTF2H1P32780 548 aa18.74■□□□□ 0.59
C6orf48-207ENST00000375642 GCLMP48507 274 aa18.74■□□□□ 0.59
C6orf48-207ENST00000375642 MYL6P60660 151 aa18.74■□□□□ 0.59
C6orf48-207ENST00000375642 ROR1Q01973 937 aa18.74■□□□□ 0.59
C6orf48-207ENST00000375642 PPP3CAQ08209 521 aa18.74■□□□□ 0.59
C6orf48-207ENST00000375642 DPCR1Q3MIW9 517 aa18.74■□□□□ 0.59
C6orf48-207ENST00000375642 RBM43Q6ZSC3 357 aaKnown RBP18.74■□□□□ 0.59
C6orf48-207ENST00000375642 TMEM86AQ8N2M4 240 aa18.74■□□□□ 0.59
C6orf48-207ENST00000375642 PDCL2Q8N4E4 241 aa18.74■□□□□ 0.59
C6orf48-207ENST00000375642 TOP6BLQ8N6T0 577 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms