RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 TAF1P21675 1872 aa13.87□□□□□ -0.19
CUL4A-203ENST00000375441 LRP5O75197 1615 aa13.87□□□□□ -0.19
CUL4A-203ENST00000375441 EXTL3O43909 919 aa13.87□□□□□ -0.19
CUL4A-203ENST00000375441 GTF2BQ00403 316 aa13.87□□□□□ -0.19
CUL4A-203ENST00000375441 PKN2Q16513 984 aaKnown RBP13.87□□□□□ -0.19
CUL4A-203ENST00000375441 APBB1IPQ7Z5R6 666 aaPredicted RBP13.87□□□□□ -0.19
CUL4A-203ENST00000375441 PIGWQ7Z7B1 504 aa13.87□□□□□ -0.19
CUL4A-203ENST00000375441 SMC1BQ8NDV3 1235 aa13.87□□□□□ -0.19
CUL4A-203ENST00000375441 TMEM121Q9BTD3 319 aa13.87□□□□□ -0.19
CUL4A-203ENST00000375441 DDX56Q9NY93 547 aaKnown RBP13.87□□□□□ -0.19
CUL4A-203ENST00000375441 PLCH1Q4KWH8 1693 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 LMNAP02545 664 aaKnown RBP13.86□□□□□ -0.19
CUL4A-203ENST00000375441 KRT16P08779 473 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 PEX5P50542 639 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 PRKCEQ02156 737 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 CCDC125Q86Z20 511 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 EXD1Q8NHP7 514 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 IL31RAQ8NI17 732 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 DTX3LQ8TDB6 740 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 ANKRD36BP1Q96IX9 119 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 CCDC160A6NGH7 325 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 TXNDC9O14530 226 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 CST8O60676 142 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 ZWINTO95229 277 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 KRT7P08729 469 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 ZNF699Q32M78 642 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 MFSD5Q6N075 450 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 NLRP9Q7RTR0 991 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 MAP7D3Q8IWC1 876 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 SYTL5Q8TDW5 730 aaPredicted RBP13.86□□□□□ -0.19
CUL4A-203ENST00000375441 ZNF277Q9NRM2 450 aaPredicted RBP13.86□□□□□ -0.19
CUL4A-203ENST00000375441 SCOCQ9UIL1 159 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 CHMP2BQ9UQN3 213 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 R3HDM2Q9Y2K5 976 aaKnown RBP13.86□□□□□ -0.19
CUL4A-203ENST00000375441 ZMYM2Q9UBW7 1377 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 KITP10721 976 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 PECAM1P16284 738 aaPredicted RBP13.86□□□□□ -0.19
CUL4A-203ENST00000375441 CHRNB2P17787 502 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 PAX7P23759 505 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 MARK3P27448 753 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 GPC3P51654 580 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 SPRED3Q2MJR0 410 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 MPHOSPH6Q99547 160 aaKnown RBP13.86□□□□□ -0.19
CUL4A-203ENST00000375441 RPAP3Q9H6T3 665 aaPredicted RBP13.86□□□□□ -0.19
CUL4A-203ENST00000375441 AS3MTQ9HBK9 375 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 DNPEPQ9ULA0 475 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 GINS2Q9Y248 185 aa13.86□□□□□ -0.19
CUL4A-203ENST00000375441 ATP8B3O60423 1300 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 TOGARAM1Q9Y4F4 1720 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 ENO4A6NNW6 628 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 WDR46O15213 610 aaKnown RBP13.85□□□□□ -0.19
CUL4A-203ENST00000375441 MED7O43513 233 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 MGRN1O60291 552 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 KRT3P12035 628 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 CAP2P40123 477 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 GCNT1Q02742 428 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 MTFR1Q15390 333 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 CYP4A22Q5TCH4 519 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 OR6B2Q6IFH4 312 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 CRELD2Q6UXH1 353 aaPredicted RBP13.85□□□□□ -0.19
CUL4A-203ENST00000375441 ARMC2Q8NEN0 867 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 SREK1Q8WXA9 508 aaKnown RBP13.85□□□□□ -0.19
CUL4A-203ENST00000375441 MIEF2Q96C03 454 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 TMEM109Q9BVC6 243 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 TSSK1BQ9BXA7 367 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 SLC13A1Q9BZW2 595 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 MYLK2Q9H1R3 596 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 ECM29Q5VYK3 1845 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 KRT37O76014 449 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 BRD2P25440 801 aaKnown RBP13.85□□□□□ -0.19
CUL4A-203ENST00000375441 POU5F1Q01860 360 aaKnown RBP13.85□□□□□ -0.19
CUL4A-203ENST00000375441 ATP13A4Q4VNC1 1196 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 CYTH2Q99418 400 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 RANBP17Q9H2T7 1088 aaKnown RBP13.85□□□□□ -0.19
CUL4A-203ENST00000375441 AVENQ9NQS1 362 aaPredicted RBP13.85□□□□□ -0.19
CUL4A-203ENST00000375441 HEY1Q9Y5J3 304 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 MAP3K7O43318 606 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 ZC3H11AO75152 810 aaKnown RBP eCLIP13.85□□□□□ -0.196e-6■■■■□ 20.9
CUL4A-203ENST00000375441 WEE2P0C1S8 567 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 GEMIN4P57678 1058 aaKnown RBP13.85□□□□□ -0.19
CUL4A-203ENST00000375441 EIF3EP60228 445 aaKnown RBP13.85□□□□□ -0.19
CUL4A-203ENST00000375441 MTMR2Q13614 643 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 DAW1Q8N136 415 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 SEC14L1Q92503 715 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 ATP2A3Q93084 1043 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 BORCS6Q96GS4 357 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 LRRC4CQ9HCJ2 640 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 ZNF302Q9NR11 478 aa13.85□□□□□ -0.19
CUL4A-203ENST00000375441 COL14A1Q05707 1796 aaKnown RBP13.85□□□□□ -0.19
CUL4A-203ENST00000375441 CCDC195A0A1B0GUA6 201 aa13.84□□□□□ -0.19
CUL4A-203ENST00000375441 TOM1L1O75674 476 aa13.84□□□□□ -0.19
CUL4A-203ENST00000375441 HADHBP55084 474 aaKnown RBP13.84□□□□□ -0.19
CUL4A-203ENST00000375441 TAF1BQ53T94 588 aaPredicted RBP13.84□□□□□ -0.19
CUL4A-203ENST00000375441 EAPPQ56P03 285 aaPredicted RBP13.84□□□□□ -0.19
CUL4A-203ENST00000375441 XKR3Q5GH77 459 aa13.84□□□□□ -0.19
CUL4A-203ENST00000375441 GPAT2Q6NUI2 795 aa13.84□□□□□ -0.19
CUL4A-203ENST00000375441 MFSD7Q6UXD7 560 aa13.84□□□□□ -0.19
CUL4A-203ENST00000375441 MAP4K3Q8IVH8 894 aa13.84□□□□□ -0.19
CUL4A-203ENST00000375441 TRIM42Q8IWZ5 723 aa13.84□□□□□ -0.19
CUL4A-203ENST00000375441 FAM161BQ96MY7 647 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms