RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 CCDC22O60826 627 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 PHF2O75151 1096 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 SPATA31D3P0C874 917 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 YY1P25490 414 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 HPCAP84074 193 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 FSTL1Q12841 308 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 MPP2Q14168 576 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.84□□□□□ -0.35
C9orf3-203ENST00000375315 ACSBG2Q5FVE4 666 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 OLFML2BQ68BL8 750 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 FOXR2Q6PJQ5 311 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 SPATA31D4Q6ZUB0 917 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 SMYD1Q8NB12 490 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 SLC10A4Q96EP9 437 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 ERVK-5Q9HDB9 667 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 NDUFA13Q9P0J0 144 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 PHTF1Q9UMS5 762 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 TELO2Q9Y4R8 837 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 SPDYE16A6NNV3 312 aaPredicted RBP12.84□□□□□ -0.35
C9orf3-203ENST00000375315 IPO5O00410 1097 aaKnown RBP12.84□□□□□ -0.35
C9orf3-203ENST00000375315 PGK2P07205 417 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 PLA2G4BP0C869 781 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 DSG3P32926 999 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 GJA8P48165 433 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 FXR2P51116 673 aaKnown RBP eCLIP12.84□□□□□ -0.35
C9orf3-203ENST00000375315 CCDC92Q53HC0 331 aaPredicted RBP12.84□□□□□ -0.35
C9orf3-203ENST00000375315 CFAP157Q5JU67 520 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 ETNPPLQ8TBG4 499 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 MCUR1Q96AQ8 359 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 MPP4Q96JB8 637 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 KCNH7Q9NS40 1196 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 SMIM31A0A1B0GVY4 71 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 RSPH10B2B2RC85 870 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 MAFGO15525 162 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 ZWINTO95229 277 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 ACSL3O95573 720 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 RSPH10BP0C881 870 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 FOXN2P32314 431 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 TAF1BQ53T94 588 aaPredicted RBP12.84□□□□□ -0.35
C9orf3-203ENST00000375315 HERC4Q5GLZ8 1057 aaPredicted RBP12.84□□□□□ -0.35
C9orf3-203ENST00000375315 EIF2AK1Q9BQI3 630 aaKnown RBP12.84□□□□□ -0.35
C9orf3-203ENST00000375315 TUBB6Q9BUF5 446 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 FGFBP2Q9BYJ0 223 aa12.84□□□□□ -0.35
C9orf3-203ENST00000375315 GREB1LQ9C091 1923 aaPredicted RBP12.83□□□□□ -0.36
C9orf3-203ENST00000375315 A0A0J9YVX5 310 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 ATP9BO43861 1147 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 PTGIRP43119 386 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 DSG1Q02413 1049 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 CALCOCO2Q13137 446 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 MOGSQ13724 837 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 CATSPERGQ6ZRH7 1159 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 IRF2BP2Q7Z5L9 587 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 ANKRD13AQ8IZ07 590 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 LRRC43Q8N309 656 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 RIBC1Q8N443 379 aaPredicted RBP12.83□□□□□ -0.36
C9orf3-203ENST00000375315 RAD54LQ92698 747 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 MAML3Q96JK9 1138 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 CADM1Q9BY67 442 aaKnown RBP12.83□□□□□ -0.36
C9orf3-203ENST00000375315 GANQ9H2C0 597 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 KRT82Q9NSB4 513 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 BTBD7Q9P203 1132 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 HSFX1Q9UBD0 423 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 TUBGCP4Q9UGJ1 667 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 DDX3YO15523 660 aaKnown RBP12.83□□□□□ -0.36
C9orf3-203ENST00000375315 GRIN3BO60391 1043 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 ZNF24P17028 368 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 MRPS9P82933 396 aaKnown RBP12.83□□□□□ -0.36
C9orf3-203ENST00000375315 SLC45A4Q5BKX6 768 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 MAP7D3Q8IWC1 876 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 SLFN12Q8IYM2 578 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 VPS52Q8N1B4 723 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 C17orf50Q8WW18 174 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 IRGQQ8WZA9 623 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 C18orf8Q96DM3 657 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 IKZF4Q9H2S9 585 aa12.83□□□□□ -0.36
C9orf3-203ENST00000375315 CDC42EP4Q9H3Q1 356 aaKnown RBP12.83□□□□□ -0.36
C9orf3-203ENST00000375315 ZNF214Q9UL59 606 aaPredicted RBP12.83□□□□□ -0.36
C9orf3-203ENST00000375315 IGLV3-22A0A075B6J6 115 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 C19orf81C9J6K1 198 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 MAGEB2O15479 319 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 OPHN1O60890 802 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 RGS2P41220 211 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 DNAJC3Q13217 504 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 MTMR1Q13613 665 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 DNAAF5Q86Y56 855 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 KSR1Q8IVT5 923 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 KBTBD2Q8IY47 623 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 SRRM1Q8IYB3 904 aaKnown RBP12.82□□□□□ -0.36
C9orf3-203ENST00000375315 CEP63Q96MT8 703 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 BTBD10Q9BSF8 475 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 UNC45AQ9H3U1 944 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 PCYOX1Q9UHG3 505 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 TBC1D30Q9Y2I9 924 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 CELF2O95319 508 aaKnown RBP12.82□□□□□ -0.36
C9orf3-203ENST00000375315 NEK3P51956 506 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 ADARP55265 1226 aaKnown RBP12.82□□□□□ -0.36
C9orf3-203ENST00000375315 USP50Q70EL3 339 aaPredicted RBP12.82□□□□□ -0.36
C9orf3-203ENST00000375315 CYFIP1Q7L576 1253 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 ART4Q93070 314 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 PPP2R3CQ969Q6 453 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms