RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 RPS6P62753 249 aaKnown RBP12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 LONRF1Q17RB8 773 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 FKBP1CQ5VVH2 108 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 POTEAQ6S8J7 498 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 MTHFD1LQ6UB35 978 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 PTF1AQ7RTS3 328 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 PATL1Q86TB9 770 aaKnown RBP12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 ACAP3Q96P50 834 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 FBXO28Q9NVF7 368 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 AGO2Q9UKV8 859 aaKnown RBP12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 GOLGA8RI6L899 631 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 CDH6P55285 790 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 ACTR2P61160 394 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 KRT33BQ14525 404 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 EDRF1Q3B7T1 1238 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 MDH1BQ5I0G3 518 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 FAM102AQ5T9C2 384 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 APOBEC3HQ6NTF7 200 aaKnown RBP12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 ADCK1Q86TW2 530 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 RBM15Q96T37 977 aaKnown RBP eCLIP12.88□□□□□ -0.356e-7■■■■□ 22.3
NPLOC4-202ENST00000374747 EGFL8Q99944 293 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 NEUROG2Q9H2A3 272 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 KCNH7Q9NS40 1196 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 PSMC3IPQ9P2W1 217 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 GAKO14976 1311 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 IRAK1P51617 712 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 ABCE1P61221 599 aaKnown RBP12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 FMR1Q06787 632 aaKnown RBP eCLIP12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 STK4Q13043 487 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 TRADDQ15628 312 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 LRRC36Q1X8D7 754 aa12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 ZKSCAN4Q969J2 545 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-202ENST00000374747 EIF3EP60228 445 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 CDC42EP1Q00587 391 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 MXD4Q14582 209 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 NYAP1Q6ZVC0 841 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 RNF135Q8IUD6 432 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 ZNF555Q8NEP9 628 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 GPRC5AQ8NFJ5 357 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 RIN2Q8WYP3 895 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 EME1Q96AY2 570 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 DHX35Q9H5Z1 703 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 SARS2Q9NP81 518 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 IL17RBQ9NRM6 502 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 APOL1O14791 398 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 FAM107AO95990 144 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 CARSP49589 748 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 ERFP50548 548 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 STX3Q13277 289 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 CYLC2Q14093 348 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 C9orf131Q5VYM1 1079 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 C1orf228Q6PIY5 440 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 TAGAPQ8N103 731 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 THEM5Q8N1Q8 247 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 BEST2Q8NFU1 509 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 BLOC1S6Q9UL45 172 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 ATP11BQ9Y2G3 1177 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 CCL15-CCL14A0A0B4J2E2 113 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 CCT8L1PA6NM43 557 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 SCP2P22307 547 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 CORO7P57737 925 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 CCL15Q16663 113 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 TRIM60Q495X7 471 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 ERO1BQ86YB8 467 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 ANKEF1Q9NU02 776 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 RBAKQ9NYW8 714 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 UVRAGQ9P2Y5 699 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 WTIPA6NIX2 430 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 MYO1DO94832 1006 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 GH1P01241 217 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 SREBF1P36956 1147 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 RFC5P40937 340 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 PKN1Q16512 942 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 P3H1Q32P28 736 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 TWF2Q6IBS0 349 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 OR6J1Q8NGC5 347 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 RBM12Q9NTZ6 932 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 CDV3Q9UKY7 258 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 MRPL28Q13084 256 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 C16orf89Q6UX73 402 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 EP400NLQ6ZTU2 488 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 RCOR2Q8IZ40 523 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 KIRREL3Q8IZU9 778 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 OR6P1Q8NGX9 317 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 PDCD6IPQ8WUM4 868 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 HPS3Q969F9 1004 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 TAAR1Q96RJ0 339 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 ROPN1BQ9BZX4 212 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 HSD3B7Q9H2F3 369 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 ROPN1Q9HAT0 212 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 SLC40A1Q9NP59 571 aa12.87□□□□□ -0.35
NPLOC4-202ENST00000374747 MSH4O15457 936 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 SERPINB3P29508 390 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 ZNF157P51786 506 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 NR1I3Q14994 352 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 RBBP7Q16576 425 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 CMTM5Q96DZ9 223 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 DBR1Q9UK59 544 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 ZBTB22O15209 634 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 EIF3DO15371 548 aaKnown RBP eCLIP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms