RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 PI4K2AQ9BTU6 479 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 PLEKHA4Q9H4M7 779 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 AGPAT3Q9NRZ7 376 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 ASNSD1Q9NWL6 643 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 CRNNQ9UBG3 495 aaPredicted RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 SRP68Q9UHB9 627 aaKnown RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 CHTOPQ9Y3Y2 248 aaKnown RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 RGPD2P0DJD1 1756 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 KMOO15229 486 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 DNAJC8O75937 253 aaPredicted RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 S100A9P06702 114 aaKnown RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 MYZAPP0CAP1 466 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 GSPT1P15170 499 aaKnown RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 ATF6P18850 670 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 JAK1P23458 1154 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 TAGLN2P37802 199 aaKnown RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 CLK2P49760 499 aaKnown RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 ATP8B2P98198 1209 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 CASP8Q14790 479 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 MEA1Q16626 185 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 KYAT1Q16773 422 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 PLA2G4EQ3MJ16 856 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 ZACNQ401N2 412 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 VARS2Q5ST30 1063 aaKnown RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 DHX32Q7L7V1 743 aaKnown RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 NKAIN4Q8IVV8 208 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 PLD6Q8N2A8 252 aaKnown RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 TTLQ8NG68 377 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 CCDC77Q9BR77 488 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 SHCBP1LQ9BZQ2 653 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 NRBP2Q9NSY0 501 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 USP40Q9NVE5 1235 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 LIMD1Q9UGP4 676 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 VAV3Q9UKW4 847 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 SIPA1L3O60292 1781 aaPredicted RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 NCF1BA6NI72 391 aaPredicted RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 NCF1CA8MVU1 366 aaPredicted RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 TRAPPC3O43617 180 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 SLITRK3O94933 977 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 GCP02774 474 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 FYNP06241 537 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 POLE2P56282 527 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 ENPEPQ07075 957 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 EFR3AQ14156 821 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 PDIA6Q15084 440 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 NONOQ15233 471 aaKnown RBP eCLIP8.37□□□□□ -1.07
USP48-203ENST00000374732 KLHL38Q2WGJ6 581 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 PDPK2PQ6A1A2 396 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 GPR142Q7Z601 462 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 TSPYL5Q86VY4 417 aaPredicted RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 SYCE1Q8N0S2 351 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 DEPDC4Q8N2C3 294 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 ABTB1Q969K4 478 aaPredicted RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 DACT3Q96B18 629 aaPredicted RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 EFHD2Q96C19 240 aaPredicted RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 ACSBG1Q96GR2 724 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 UBXN6Q9BZV1 441 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 UNKQ9C0B0 810 aaKnown RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 CAB39Q9Y376 341 aaPredicted RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 CBY1Q9Y3M2 126 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 PCDHB4Q9Y5E5 795 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 FADS3Q9Y5Q0 445 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 TUBGCP6Q96RT7 1819 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 ZNF804BA4D1E1 1349 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 AP3D1O14617 1153 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 CNOT4O95628 575 aaKnown RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 IFNB1P01574 187 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 ASGR1P07306 291 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 CYP2C9P11712 490 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 CCNA2P20248 432 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 TTKP33981 857 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 TM4SF4P48230 202 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 USP39Q53GS9 565 aaKnown RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 KRTCAP3Q53RY4 240 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 C11orf88Q6PI97 169 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 ZYG11AQ6WRX3 759 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 REM2Q8IYK8 340 aaPredicted RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 ST13P5Q8NFI4 369 aaPredicted RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 PHOSPHO2Q8TCD6 241 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 METTL2AQ96IZ6 378 aaKnown RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 SEC62Q99442 399 aaKnown RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 BTBD2Q9BX70 525 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 MIS12Q9H081 205 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 STRN4Q9NRL3 753 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 METTL5Q9NRN9 209 aaKnown RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 CYTH4Q9UIA0 394 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 RPAP1Q9BWH6 1393 aaPredicted RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 URI1O94763 535 aaPredicted RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 ARHGEF15O94989 841 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 ASMTLO95671 621 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 ECDO95905 644 aaPredicted RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 PYGMP11217 842 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 CNTFP26441 200 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 SHEQ5VZ18 495 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 PM20D1Q6GTS8 502 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 C16orf86Q6ZW13 317 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 USP37Q86T82 979 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 FAM124AQ86V42 546 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 TMTC1Q8IUR5 882 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms