RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 TFAP2BQ92481 460 aa18.09■□□□□ 0.49
RXRB-201ENST00000374680 RNF19AQ9NV58 838 aa18.09■□□□□ 0.49
RXRB-201ENST00000374680 PCSK1NQ9UHG2 260 aa18.09■□□□□ 0.49
RXRB-201ENST00000374680 CNTNAP2Q9UHC6 1331 aa18.08■□□□□ 0.49
RXRB-201ENST00000374680 NRLP54845 237 aa18.08■□□□□ 0.49
RXRB-201ENST00000374680 FASTKD3Q14CZ7 662 aaKnown RBP18.08■□□□□ 0.49
RXRB-201ENST00000374680 TMEM174Q8WUU8 243 aa18.08■□□□□ 0.49
RXRB-201ENST00000374680 CNOT10Q9H9A5 744 aaKnown RBP18.08■□□□□ 0.49
RXRB-201ENST00000374680 NINJ2Q9NZG7 142 aa18.08■□□□□ 0.49
RXRB-201ENST00000374680 C19orf81C9J6K1 198 aa18.08■□□□□ 0.48
RXRB-201ENST00000374680 NOP56O00567 594 aaKnown RBP18.08■□□□□ 0.48
RXRB-201ENST00000374680 FARP2O94887 1054 aaPredicted RBP18.08■□□□□ 0.48
RXRB-201ENST00000374680 RPS12P25398 132 aaKnown RBP18.08■□□□□ 0.48
RXRB-201ENST00000374680 CLCN3P51790 818 aa18.08■□□□□ 0.48
RXRB-201ENST00000374680 NFX1Q12986 1120 aaKnown RBP18.08■□□□□ 0.48
RXRB-201ENST00000374680 TMEM121Q9BTD3 319 aa18.08■□□□□ 0.48
RXRB-201ENST00000374680 ELP3Q9H9T3 547 aa18.08■□□□□ 0.48
RXRB-201ENST00000374680 KIAA1586Q9HCI6 787 aa18.08■□□□□ 0.48
RXRB-201ENST00000374680 SAYSD1Q9NPB0 183 aa18.08■□□□□ 0.48
RXRB-201ENST00000374680 CISHQ9NSE2 258 aa18.08■□□□□ 0.48
RXRB-201ENST00000374680 NRBP2Q9NSY0 501 aa18.08■□□□□ 0.48
RXRB-201ENST00000374680 ZNFX1Q9P2E3 1918 aaKnown RBP18.08■□□□□ 0.48
RXRB-201ENST00000374680 FER1L6Q2WGJ9 1857 aa18.08■□□□□ 0.48
RXRB-201ENST00000374680 AGTP01019 485 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 ITIH2P19823 946 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 TGFB2P61812 414 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 TMED2Q15363 201 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 NLGN2Q8NFZ4 835 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 CGRRF1Q99675 332 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 ADAMTS5Q9UNA0 930 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 NFASCO94856 1347 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 ADM5C9JUS6 153 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 TTC4O95801 387 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 BRAFP15056 766 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 ACTN3Q08043 901 aaPredicted RBP18.07■□□□□ 0.48
RXRB-201ENST00000374680 GPS1Q13098 491 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 CNGA2Q16280 664 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 NUGGCQ68CJ6 796 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 SLFN12LQ6IEE8 588 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 DNAJC24Q6P3W2 148 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 CCDC197Q8NCU1 140 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 CLMNQ96JQ2 1002 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 ZNF317Q96PQ6 595 aaPredicted RBP18.07■□□□□ 0.48
RXRB-201ENST00000374680 RBM15Q96T37 977 aaKnown RBP eCLIP18.07■□□□□ 0.484e-6■■□□□ 13.6
RXRB-201ENST00000374680 VPS33BQ9H267 617 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 CD248Q9HCU0 757 aa18.07■□□□□ 0.48
RXRB-201ENST00000374680 MRPL47Q9HD33 250 aaKnown RBP18.07■□□□□ 0.48
RXRB-201ENST00000374680 COL11A1P12107 1806 aaPredicted RBP18.06■□□□□ 0.48
RXRB-201ENST00000374680 ADCY3O60266 1144 aa18.06■□□□□ 0.48
RXRB-201ENST00000374680 USP2O75604 605 aaPredicted RBP18.06■□□□□ 0.48
RXRB-201ENST00000374680 GAD2Q05329 585 aa18.06■□□□□ 0.48
RXRB-201ENST00000374680 TTLL12Q14166 644 aaPredicted RBP18.06■□□□□ 0.48
RXRB-201ENST00000374680 EEF1DP3Q658K8 133 aa18.06■□□□□ 0.48
RXRB-201ENST00000374680 ANKMY2Q8IV38 441 aa18.06■□□□□ 0.48
RXRB-201ENST00000374680 AVENQ9NQS1 362 aaPredicted RBP18.06■□□□□ 0.48
RXRB-201ENST00000374680 ZNF112Q9UJU3 913 aa18.06■□□□□ 0.48
RXRB-201ENST00000374680 ZC3H11AO75152 810 aaKnown RBP eCLIP18.06■□□□□ 0.486e-7■■■□□ 17.4
RXRB-201ENST00000374680 ARSEP51690 589 aa18.06■□□□□ 0.48
RXRB-201ENST00000374680 LAMTOR4Q0VGL1 99 aa18.06■□□□□ 0.48
RXRB-201ENST00000374680 R3HDM1Q15032 1099 aaKnown RBP18.06■□□□□ 0.48
RXRB-201ENST00000374680 FAM47EQ6ZV65 393 aa18.06■□□□□ 0.48
RXRB-201ENST00000374680 FBXO16Q8IX29 292 aaPredicted RBP18.06■□□□□ 0.48
RXRB-201ENST00000374680 LRRN4Q8WUT4 740 aa18.06■□□□□ 0.48
RXRB-201ENST00000374680 RUNDC3BQ96NL0 473 aa18.06■□□□□ 0.48
RXRB-201ENST00000374680 KIF9Q9HAQ2 790 aa18.06■□□□□ 0.48
RXRB-201ENST00000374680 PARVAQ9NVD7 372 aa18.06■□□□□ 0.48
RXRB-201ENST00000374680 WHRNQ9P202 907 aa18.06■□□□□ 0.48
RXRB-201ENST00000374680 IRF6O14896 467 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 TMEM191BP0C7N4 346 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 SLC1A1P43005 524 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 ZNF252P-AS1Q0IIN9 211 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 SAMD15Q9P1V8 674 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 NAALADL1Q9UQQ1 740 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 GINS2Q9Y248 185 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 H0YCG3 227 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 SGK1O00141 431 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 DDNO94850 711 aaPredicted RBP18.05■□□□□ 0.48
RXRB-201ENST00000374680 PRKCBP05771 671 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 RTP1P59025 263 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 WDR72Q3MJ13 1102 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 ANKRD20A8PQ5CZ79 823 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 ERICH1Q86X53 443 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 C12orf50Q8NA57 414 aaPredicted RBP18.05■□□□□ 0.48
RXRB-201ENST00000374680 TRAIPQ9BWF2 469 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 SLC40A1Q9NP59 571 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 ABCF3Q9NUQ8 709 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 SCTRP47872 440 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 IRX3P78415 501 aaPredicted RBP18.05■□□□□ 0.48
RXRB-201ENST00000374680 PTP4A2Q12974 167 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 PTK6Q13882 451 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 DENND1BQ6P3S1 775 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 RHBDF2Q6PJF5 856 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 TAOK1Q7L7X3 1001 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 SEPT1Q8WYJ6 367 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 FAM81BQ96LP2 452 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 SYNCQ9H7C4 482 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 VPS37BQ9H9H4 285 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 PDGFCQ9NRA1 345 aa18.05■□□□□ 0.48
RXRB-201ENST00000374680 MAP3K6O95382 1288 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 ITGBL1O95965 494 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms