RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 TUSC3Q13454 348 aa18.8■□□□□ 0.6
PFDN6-201ENST00000374606 TMEM130Q8N3G9 435 aa18.8■□□□□ 0.6
PFDN6-201ENST00000374606 CXorf38Q8TB03 319 aa18.8■□□□□ 0.6
PFDN6-201ENST00000374606 CPLX3Q8WVH0 158 aa18.8■□□□□ 0.6
PFDN6-201ENST00000374606 ZNF560Q96MR9 790 aa18.8■□□□□ 0.6
PFDN6-201ENST00000374606 MRPL9Q9BYD2 267 aaKnown RBP18.8■□□□□ 0.6
PFDN6-201ENST00000374606 EDEM3Q9BZQ6 932 aa18.8■□□□□ 0.6
PFDN6-201ENST00000374606 FBXL5Q9UKA1 691 aa18.8■□□□□ 0.6
PFDN6-201ENST00000374606 FNDC1Q4ZHG4 1894 aaPredicted RBP18.8■□□□□ 0.6
PFDN6-201ENST00000374606 A0A1W2PQJ5 194 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 MFAP3LO75121 409 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 NOL4O94818 638 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 UPP2O95045 317 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 CASP14P31944 242 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 GSDMDP57764 484 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 RNASELQ05823 741 aaKnown RBP18.79■□□□□ 0.6
PFDN6-201ENST00000374606 MYO1EQ12965 1108 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 NAB2Q15742 525 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 C9orf57Q5W0N0 161 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 IQCEQ6IPM2 695 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 SPOPLQ6IQ16 392 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 DPY19L2P1Q6NXN4 242 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 GJB7Q6PEY0 223 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 CNGA4Q8IV77 575 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 ARHGEF19Q8IW93 802 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 CRIPAKQ8N1N5 446 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 PPM1KQ8N3J5 372 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 LRRC52Q8N7C0 313 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 ZNF397Q8NF99 534 aaPredicted RBP18.79■□□□□ 0.6
PFDN6-201ENST00000374606 PABPC5Q96DU9 382 aaKnown RBP18.79■□□□□ 0.6
PFDN6-201ENST00000374606 HPDLQ96IR7 371 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 FAM81BQ96LP2 452 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 NLRC4Q9NPP4 1024 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 TBC1D13Q9NVG8 400 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 PRKAG3Q9UGI9 489 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 DNAJC12Q9UKB3 198 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 CAPN11Q9UMQ6 739 aa18.79■□□□□ 0.6
PFDN6-201ENST00000374606 ANO9A1A5B4 782 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 CASTOR2A6NHX0 329 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 AKR1B15C9JRZ8 316 aaPredicted RBP18.78■□□□□ 0.6
PFDN6-201ENST00000374606 STAU1O95793 577 aaKnown RBP18.78■□□□□ 0.6
PFDN6-201ENST00000374606 PNPLA4P41247 253 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 GATMP50440 423 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 ZP2Q05996 745 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 GPM6BQ13491 265 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 RAPGEF1Q13905 1077 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 ZNF667Q5HYK9 610 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 SCARA3Q6AZY7 606 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 PHLDB3Q6NSJ2 640 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 LRRC43Q8N309 656 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 TOP1MTQ969P6 601 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 ELMO3Q96BJ8 720 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 UROC1Q96N76 676 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 CASD1Q96PB1 797 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 FAM193BQ96PV7 902 aaPredicted RBP18.78■□□□□ 0.6
PFDN6-201ENST00000374606 SPAG5Q96R06 1193 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 YME1L1Q96TA2 773 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 NIF3L1Q9GZT8 377 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 XYLT2Q9H1B5 865 aa18.78■□□□□ 0.6
PFDN6-201ENST00000374606 APOBEC3GQ9HC16 384 aaKnown RBP18.78■□□□□ 0.6
PFDN6-201ENST00000374606 UBE2TQ9NPD8 197 aaPredicted RBP18.78■□□□□ 0.6
PFDN6-201ENST00000374606 LUC7L2Q9Y383 392 aaKnown RBP18.78■□□□□ 0.6
PFDN6-201ENST00000374606 COL4A6Q14031 1691 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 TBKBP1A7MCY6 615 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 H3BNC9 293 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 PODXLO00592 558 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 PIRO00625 290 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 PPEF2O14830 753 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 P4HA1P13674 534 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 TBXAS1P24557 533 aaPredicted RBP18.77■□□□□ 0.6
PFDN6-201ENST00000374606 RPL9P32969 192 aaKnown RBP18.77■□□□□ 0.6
PFDN6-201ENST00000374606 KRT9P35527 623 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 MFAP3P55082 362 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 ZBED6P86452 979 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 GCNT1Q02742 428 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 SV2CQ496J9 727 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 TCEAL5Q5H9L2 206 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 EP400NLQ6ZTU2 488 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 RRAGAQ7L523 313 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 ENOSF1Q7L5Y1 443 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 CCDC186Q7Z3E2 898 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 TATDN2Q93075 761 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 DDX27Q96GQ7 796 aaKnown RBP18.77■□□□□ 0.6
PFDN6-201ENST00000374606 NSUN3Q9H649 340 aaKnown RBP18.77■□□□□ 0.6
PFDN6-201ENST00000374606 VRTNQ9H8Y1 702 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 AJAP1Q9UKB5 411 aaPredicted RBP18.77■□□□□ 0.6
PFDN6-201ENST00000374606 NUB1Q9Y5A7 615 aa18.77■□□□□ 0.6
PFDN6-201ENST00000374606 ZNF318Q5VUA4 2279 aa18.76■□□□□ 0.59
PFDN6-201ENST00000374606 DGKIO75912 1065 aa18.76■□□□□ 0.59
PFDN6-201ENST00000374606 TAF6P49848 677 aa18.76■□□□□ 0.59
PFDN6-201ENST00000374606 CLCNKBP51801 687 aa18.76■□□□□ 0.59
PFDN6-201ENST00000374606 TNNC1P63316 161 aa18.76■□□□□ 0.59
PFDN6-201ENST00000374606 DSC1Q08554 894 aa18.76■□□□□ 0.59
PFDN6-201ENST00000374606 GOLGA8FQ08AF8 430 aa18.76■□□□□ 0.59
PFDN6-201ENST00000374606 GOLGA8DPQ0D2H9 430 aa18.76■□□□□ 0.59
PFDN6-201ENST00000374606 CUL2Q13617 745 aa18.76■□□□□ 0.59
PFDN6-201ENST00000374606 COL19A1Q14993 1142 aa18.76■□□□□ 0.59
PFDN6-201ENST00000374606 ARHGAP44Q17R89 818 aa18.76■□□□□ 0.59
PFDN6-201ENST00000374606 BAP1Q92560 729 aa18.76■□□□□ 0.59
PFDN6-201ENST00000374606 NAA15Q9BXJ9 866 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms