RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 COL11A1P12107 1806 aaPredicted RBP19■□□□□ 0.63
PHF1-201ENST00000374512 DNALI1O14645 258 aaPredicted RBP19■□□□□ 0.63
PHF1-201ENST00000374512 TJP3O95049 919 aa19■□□□□ 0.63
PHF1-201ENST00000374512 PSAPP07602 524 aa19■□□□□ 0.63
PHF1-201ENST00000374512 TNNI1P19237 187 aa19■□□□□ 0.63
PHF1-201ENST00000374512 PIK3CAP42336 1068 aa19■□□□□ 0.63
PHF1-201ENST00000374512 VPS41P49754 854 aa19■□□□□ 0.63
PHF1-201ENST00000374512 LIG4P49917 911 aa19■□□□□ 0.63
PHF1-201ENST00000374512 TAS2R40P59535 323 aa19■□□□□ 0.63
PHF1-201ENST00000374512 NFX1Q12986 1120 aaKnown RBP19■□□□□ 0.63
PHF1-201ENST00000374512 MKRN4PQ13434 485 aaPredicted RBP19■□□□□ 0.63
PHF1-201ENST00000374512 P3H1Q32P28 736 aa19■□□□□ 0.63
PHF1-201ENST00000374512 TMEM63BQ5T3F8 832 aa19■□□□□ 0.63
PHF1-201ENST00000374512 SAMD7Q7Z3H4 446 aa19■□□□□ 0.63
PHF1-201ENST00000374512 TRABD2AQ86V40 505 aa19■□□□□ 0.63
PHF1-201ENST00000374512 FEZF2Q8TBJ5 459 aa19■□□□□ 0.63
PHF1-201ENST00000374512 TBC1D31Q96DN5 1066 aa19■□□□□ 0.63
PHF1-201ENST00000374512 WNK4Q96J92 1243 aa19■□□□□ 0.63
PHF1-201ENST00000374512 RAB3IPQ96QF0 476 aaPredicted RBP19■□□□□ 0.63
PHF1-201ENST00000374512 TBK1Q9UHD2 729 aa19■□□□□ 0.63
PHF1-201ENST00000374512 TLR3O15455 904 aaKnown RBP18.99■□□□□ 0.63
PHF1-201ENST00000374512 LIASO43766 372 aa18.99■□□□□ 0.63
PHF1-201ENST00000374512 WFS1O76024 890 aa18.99■□□□□ 0.63
PHF1-201ENST00000374512 KCNA2P16389 499 aa18.99■□□□□ 0.63
PHF1-201ENST00000374512 PTPN7P35236 360 aa18.99■□□□□ 0.63
PHF1-201ENST00000374512 SOX10P56693 466 aa18.99■□□□□ 0.63
PHF1-201ENST00000374512 BACE1P56817 501 aa18.99■□□□□ 0.63
PHF1-201ENST00000374512 LACTBP83111 547 aaPredicted RBP18.99■□□□□ 0.63
PHF1-201ENST00000374512 CRYMQ14894 314 aa18.99■□□□□ 0.63
PHF1-201ENST00000374512 EAPPQ56P03 285 aaPredicted RBP18.99■□□□□ 0.63
PHF1-201ENST00000374512 DCAF15Q66K64 600 aa18.99■□□□□ 0.63
PHF1-201ENST00000374512 SLFN12LQ6IEE8 588 aa18.99■□□□□ 0.63
PHF1-201ENST00000374512 C9orf72Q96LT7 481 aa18.99■□□□□ 0.63
PHF1-201ENST00000374512 C11orf70Q9BRQ4 267 aa18.99■□□□□ 0.63
PHF1-201ENST00000374512 MLXIPLQ9NP71 852 aa18.99■□□□□ 0.63
PHF1-201ENST00000374512 EXOC1LA0A1B0GW35 172 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 UNC5CO95185 931 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 ASMTLO95671 621 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 LDHAP00338 332 aaKnown RBP18.98■□□□□ 0.63
PHF1-201ENST00000374512 GNA15P30679 374 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 GBP2P32456 591 aaPredicted RBP18.98■□□□□ 0.63
PHF1-201ENST00000374512 DSG3P32926 999 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 MSH2P43246 934 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 MORF4L2Q15014 288 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 CCDC142Q17RM4 750 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 TDRD10Q5VZ19 366 aaKnown RBP18.98■□□□□ 0.63
PHF1-201ENST00000374512 SNRNP48Q6IEG0 339 aaKnown RBP18.98■□□□□ 0.63
PHF1-201ENST00000374512 CGB2Q6NT52 195 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 TAS1R3Q7RTX0 852 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 NSUN6Q8TEA1 469 aaKnown RBP18.98■□□□□ 0.63
PHF1-201ENST00000374512 AS3MTQ9HBK9 375 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 C15orf41Q9Y2V0 281 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 LTBP3Q9NS15 1303 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 PIGRP01833 764 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 OAZ1P54368 228 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 YARSP54577 528 aaKnown RBP18.98■□□□□ 0.63
PHF1-201ENST00000374512 SPARCL1Q14515 664 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 SETDB1Q15047 1291 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 ZKSCAN8Q15776 578 aaPredicted RBP18.98■□□□□ 0.63
PHF1-201ENST00000374512 SPDYAQ5MJ70 313 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 NBPF12Q5TAG4 269 aaPredicted RBP18.98■□□□□ 0.63
PHF1-201ENST00000374512 SWSAP1Q6NVH7 229 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 DENND1AQ8TEH3 1009 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 AGAP11Q8TF27 550 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 CDHR1Q96JP9 859 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 JPH1Q9HDC5 661 aaPredicted RBP18.98■□□□□ 0.63
PHF1-201ENST00000374512 XPNPEP1Q9NQW7 623 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 BATF3Q9NR55 127 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 CYP26B1Q9NR63 512 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 PCDHB4Q9Y5E5 795 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 DOCK5Q9H7D0 1870 aa18.98■□□□□ 0.63
PHF1-201ENST00000374512 ATP2A1O14983 1001 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 ANP32DO95626 131 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 CALCAP01258 141 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 ATP11AP98196 1134 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 TMED2Q15363 201 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 ALLCQ8N6M5 410 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 MAB21L3Q8N8X9 362 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 RMDN2Q96LZ7 410 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 PWWP2AQ96N64 755 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 ANKRD27Q96NW4 1050 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 PHACTR1Q9C0D0 580 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 SAYSD1Q9NPB0 183 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 SEPT9Q9UHD8 586 aaPredicted RBP18.97■□□□□ 0.63
PHF1-201ENST00000374512 SLC24A2Q9UI40 661 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 GGT7Q9UJ14 662 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 AGO2Q9UKV8 859 aaKnown RBP18.97■□□□□ 0.63
PHF1-201ENST00000374512 USH1CQ9Y6N9 552 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 PHIPQ8WWQ0 1821 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 KRT16P08779 473 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 FOXN2P32314 431 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 WDR4P57081 412 aaKnown RBP18.97■□□□□ 0.63
PHF1-201ENST00000374512 PARP6Q2NL67 630 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 MIS18BP1Q6P0N0 1132 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 ECHDC2Q86YB7 292 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 SCYL3Q8IZE3 742 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 REPS2Q8NFH8 660 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 SSU72Q9NP77 194 aaKnown RBP18.97■□□□□ 0.63
PHF1-201ENST00000374512 DONSONQ9NYP3 566 aa18.97■□□□□ 0.63
PHF1-201ENST00000374512 SLC9A2Q9UBY0 812 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms