RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ROBO3Q96MS0 1386 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 WDR91A4D1P6 747 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 KLRF2D3W0D1 207 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 PDXKO00764 312 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 SLC16A3O15427 465 aaKnown RBP13.62□□□□□ -0.23
PRPF4-201ENST00000374198 SPOPO43791 374 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 FKBP6O75344 327 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 TM7SF2O76062 418 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 KRT18P05783 430 aaKnown RBP13.62□□□□□ -0.23
PRPF4-201ENST00000374198 BCRP11274 1271 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 CPA2P48052 419 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 KLHL35Q6PF15 583 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 UGT2A3Q6UWM9 527 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 TRIM67Q6ZTA4 783 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 TTC7BQ86TV6 843 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 CPNE8Q86YQ8 564 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 ALDH16A1Q8IZ83 802 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 ZNF276Q8N554 614 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 CEP70Q8NHQ1 597 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 FNDC8Q8TC99 324 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 ZNF384Q8TF68 577 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 FAM172AQ8WUF8 416 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 C17orf50Q8WW18 174 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 SPIRE2Q8WWL2 714 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 GFM2Q969S9 779 aaKnown RBP13.62□□□□□ -0.23
PRPF4-201ENST00000374198 AGPAT1Q99943 283 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 ANKRD2Q9GZV1 360 aa13.62□□□□□ -0.23
PRPF4-201ENST00000374198 CHORDC1Q9UHD1 332 aaPredicted RBP13.62□□□□□ -0.23
PRPF4-201ENST00000374198 A0A1W2PPM1 405 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 TRIM43BA6NCK2 446 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 CCDC160A6NGH7 325 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 H3BRJ5 948 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 NDC80O14777 642 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 NR3C1P04150 777 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 TFAP2AP05549 437 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 DPEP1P16444 411 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 RRM1P23921 792 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 ADRA1DP25100 572 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 MAN1A1P33908 653 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 DLG1Q12959 904 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 LRRC36Q1X8D7 754 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 MMEL1Q495T6 779 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 HYIQ5T013 277 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 FAM91A1Q658Y4 838 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 CC2D2BQ6DHV5 1058 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 LRRC8BQ6P9F7 803 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 ULK2Q8IYT8 1036 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 NUP93Q8N1F7 819 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 CCDC24Q8N4L8 307 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 GRK7Q8WTQ7 553 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 ATG4AQ8WYN0 398 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 FAIMQ9NVQ4 179 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 KIAA1024Q9UPX6 916 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 SPDYE16A6NNV3 312 aaPredicted RBP13.61□□□□□ -0.23
PRPF4-201ENST00000374198 POTECB2RU33 542 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 BOLA2-SMG1P6H3BVE0 249 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 FCHO1O14526 889 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 RGL2O15211 777 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 PORP16435 677 aaPredicted RBP13.61□□□□□ -0.23
PRPF4-201ENST00000374198 GSTM4Q03013 218 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 KIF22Q14807 665 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 MAP3K21Q5TCX8 1036 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 C1orf146Q5VVC0 180 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 SPTY2D1Q68D10 685 aaPredicted RBP13.61□□□□□ -0.23
PRPF4-201ENST00000374198 DHDDSQ86SQ9 333 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 FBXO27Q8NI29 283 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 CLPTM1LQ96KA5 538 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 RBM15Q96T37 977 aaKnown RBP eCLIP13.61□□□□□ -0.23
PRPF4-201ENST00000374198 RBM38Q9H0Z9 239 aaKnown RBP13.61□□□□□ -0.23
PRPF4-201ENST00000374198 MANSC1Q9H8J5 431 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 SLC7A8Q9UHI5 535 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 DDX25Q9UHL0 483 aaKnown RBP13.61□□□□□ -0.23
PRPF4-201ENST00000374198 PLA2G4CQ9UP65 541 aa13.61□□□□□ -0.23
PRPF4-201ENST00000374198 BIRC5O15392 142 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 MTA2O94776 668 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 ALOX15P16050 662 aaPredicted RBP13.6□□□□□ -0.23
PRPF4-201ENST00000374198 AQP4P55087 323 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 GEMIN4P57678 1058 aaKnown RBP13.6□□□□□ -0.23
PRPF4-201ENST00000374198 XIAPP98170 497 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 KBTBD12Q3ZCT8 623 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 ANKRD20A4Q4UJ75 823 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 SBK1Q52WX2 424 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 HSP90AA5PQ58FG0 334 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 AAGABQ6PD74 315 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 SLF2Q8IX21 1173 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 BBOF1Q8ND07 529 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 RBM15BQ8NDT2 890 aaKnown RBP13.6□□□□□ -0.23
PRPF4-201ENST00000374198 HSPBAP1Q96EW2 488 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 OXNAD1Q96HP4 312 aaPredicted RBP13.6□□□□□ -0.23
PRPF4-201ENST00000374198 MAK16Q9BXY0 300 aaKnown RBP13.6□□□□□ -0.23
PRPF4-201ENST00000374198 KLHL4Q9C0H6 718 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 PFDN4Q9NQP4 134 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 ARMCX1Q9P291 453 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 TDRKHQ9Y2W6 561 aaKnown RBP13.6□□□□□ -0.23
PRPF4-201ENST00000374198 TELO2Q9Y4R8 837 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 KDM3AQ9Y4C1 1321 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 CACNA1SQ13698 1873 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 ERVV-1B6SEH8 477 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 CLPTM1O96005 669 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 YBX3P16989 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms