RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 SNCAIPQ9Y6H5 919 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 USP54Q70EL1 1684 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 UBR2Q8IWV8 1755 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 PLIN4Q96Q06 1357 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 A8MXQ7 604 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 HBP1O60381 514 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 NPTXRO95502 500 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 TBXAS1P24557 533 aaPredicted RBP8.24□□□□□ -1.09
HERC4-202ENST00000373700 HSD17B4P51659 736 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 GTF2A2P52657 109 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 EFNA5P52803 228 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 ZNF280AP59817 542 aaPredicted RBP8.24□□□□□ -1.09
HERC4-202ENST00000373700 MXD4Q14582 209 aaPredicted RBP8.24□□□□□ -1.09
HERC4-202ENST00000373700 SNCBQ16143 134 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 ACAD10Q6JQN1 1059 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 EMC1Q8N766 993 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 PPM1NQ8N819 430 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 PARD3BQ8TEW8 1205 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 BSNDQ8WZ55 320 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 RBM41Q96IZ5 413 aaKnown RBP8.24□□□□□ -1.09
HERC4-202ENST00000373700 ACAP3Q96P50 834 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 NMRK2Q9NPI5 230 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 SMYD2Q9NRG4 433 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 PSD3Q9NYI0 1048 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 INTUQ9ULD6 942 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 ZNF536O15090 1300 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 H0Y3Z8 333 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 CXCL11O14625 94 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 MEFVO15553 781 aaPredicted RBP8.24□□□□□ -1.09
HERC4-202ENST00000373700 B4GALT5O43286 388 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 BYSLQ13895 437 aaKnown RBP8.24□□□□□ -1.09
HERC4-202ENST00000373700 PTGISQ16647 500 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 ENOSF1Q7L5Y1 443 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 PRUNE1Q86TP1 453 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 ACTRT1Q8TDG2 376 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 RSRC1Q96IZ7 334 aaKnown RBP8.24□□□□□ -1.09
HERC4-202ENST00000373700 FAM193BQ96PV7 902 aaPredicted RBP8.24□□□□□ -1.09
HERC4-202ENST00000373700 GCOM2Q9BZD3 368 aaPredicted RBP8.24□□□□□ -1.09
HERC4-202ENST00000373700 C2orf40Q9H1Z8 148 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 FGFR1OP2Q9NVK5 253 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.24□□□□□ -1.09
HERC4-202ENST00000373700 IP6K2Q9UHH9 426 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 ATRNL1Q5VV63 1379 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 EXTL3O43909 919 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 PIAS1O75925 651 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 CPP00450 1065 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 CALB1P05937 261 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 AKAP5P24588 427 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 HNRNPH3P31942 346 aaKnown RBP8.23□□□□□ -1.09
HERC4-202ENST00000373700 TNFSF9P41273 254 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 SNX16P57768 344 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 IER5Q5VY09 327 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 FAM117BQ6P1L5 589 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 XRRA1Q6P2D8 792 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 PLEKHH3Q7Z736 793 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 ABI1Q8IZP0 508 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 DNAAF3Q8N9W5 541 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.23□□□□□ -1.09
HERC4-202ENST00000373700 TGS1Q96RS0 853 aaKnown RBP8.23□□□□□ -1.09
HERC4-202ENST00000373700 SLC13A1Q9BZW2 595 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 C10orf88Q9H8K7 445 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 TMEM120BA0PK00 339 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 CST8O60676 142 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 MAP2K2P36507 400 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 CYP24A1Q07973 514 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 CACNB2Q08289 660 aaPredicted RBP8.23□□□□□ -1.09
HERC4-202ENST00000373700 GEN1Q17RS7 908 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 TTMPQ5BVD1 217 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 ZBTB41Q5SVQ8 909 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 FAXCQ5TGI0 409 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 RSPH3Q86UC2 560 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 HACE1Q8IYU2 909 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 MYCBPAPQ8TBZ2 947 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 MICAL1Q8TDZ2 1067 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 HASPINQ8TF76 798 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 ALG3Q92685 438 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 XPO6Q96QU8 1125 aaKnown RBP8.23□□□□□ -1.09
HERC4-202ENST00000373700 LRRC4Q9HBW1 653 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 TXNRD2Q9NNW7 524 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 AFG3L2Q9Y4W6 797 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 ARHGAP42A6NI28 874 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 RARAP10276 462 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 KITP10721 976 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 LCP1P13796 627 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 GLRA2P23416 452 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 ANXA13P27216 316 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 FLT3P36888 993 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 IFI35P80217 286 aaPredicted RBP8.23□□□□□ -1.09
HERC4-202ENST00000373700 CUL2Q13617 745 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 ZCWPW2Q504Y3 356 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 LBX2Q6XYB7 198 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 TMEM161BQ8NDZ6 487 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 DNAJB3Q8WWF6 145 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 PWWP2AQ96N64 755 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 INPP4AQ96PE3 977 aaPredicted RBP8.23□□□□□ -1.09
HERC4-202ENST00000373700 SENP7Q9BQF6 1050 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 PABPC3Q9H361 631 aaKnown RBP8.23□□□□□ -1.09
HERC4-202ENST00000373700 MROH8Q9H579 483 aa8.23□□□□□ -1.09
HERC4-202ENST00000373700 DHX35Q9H5Z1 703 aaKnown RBP8.23□□□□□ -1.09
HERC4-202ENST00000373700 AJAP1Q9UKB5 411 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms