RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 PRELID2Q8N945 189 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 C1orf131Q8NDD1 294 aaKnown RBP20.84■□□□□ 0.93
HDAC1-201ENST00000373548 FAM71BQ8TC56 605 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 ACAP3Q96P50 834 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 CDHR5Q9HBB8 845 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 MRPL47Q9HD33 250 aaKnown RBP20.84■□□□□ 0.93
HDAC1-201ENST00000373548 PCDHGC3Q9UN70 934 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 GINS2Q9Y248 185 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 PROSCO94903 275 aa20.83■□□□□ 0.93
HDAC1-201ENST00000373548 CDH8P55286 799 aa20.83■□□□□ 0.93
HDAC1-201ENST00000373548 MFSD10Q14728 455 aa20.83■□□□□ 0.93
HDAC1-201ENST00000373548 TMEM132DQ14C87 1099 aa20.83■□□□□ 0.93
HDAC1-201ENST00000373548 SLC13A5Q86YT5 568 aaPredicted RBP20.83■□□□□ 0.93
HDAC1-201ENST00000373548 SEC14L1Q92503 715 aa20.83■□□□□ 0.93
HDAC1-201ENST00000373548 FAXDC2Q96IV6 333 aa20.83■□□□□ 0.93
HDAC1-201ENST00000373548 SCINQ9Y6U3 715 aa20.83■□□□□ 0.93
HDAC1-201ENST00000373548 TCRBV7S2A1N4TA0A589 114 aa20.83■□□□□ 0.92
HDAC1-201ENST00000373548 HOXA11P31270 313 aaPredicted RBP20.83■□□□□ 0.92
HDAC1-201ENST00000373548 CDH5P33151 784 aaPredicted RBP20.83■□□□□ 0.92
HDAC1-201ENST00000373548 GGCXP38435 758 aa20.83■□□□□ 0.92
HDAC1-201ENST00000373548 GRM5P41594 1212 aa20.83■□□□□ 0.92
HDAC1-201ENST00000373548 GUCY2FP51841 1108 aa20.83■□□□□ 0.92
HDAC1-201ENST00000373548 GLIPR1L2Q4G1C9 344 aa20.83■□□□□ 0.92
HDAC1-201ENST00000373548 RUFY4Q6ZNE9 571 aa20.83■□□□□ 0.92
HDAC1-201ENST00000373548 WDTC1Q8N5D0 677 aa20.83■□□□□ 0.92
HDAC1-201ENST00000373548 WHAMMQ8TF30 809 aa20.83■□□□□ 0.92
HDAC1-201ENST00000373548 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.83■□□□□ 0.92
HDAC1-201ENST00000373548 GCOM2Q9BZD3 368 aaPredicted RBP20.83■□□□□ 0.92
HDAC1-201ENST00000373548 SMYD3Q9H7B4 428 aa20.83■□□□□ 0.92
HDAC1-201ENST00000373548 VRTNQ9H8Y1 702 aa20.83■□□□□ 0.92
HDAC1-201ENST00000373548 GJD2Q9UKL4 321 aa20.83■□□□□ 0.92
HDAC1-201ENST00000373548 RALGAPA2Q2PPJ7 1873 aa20.82■□□□□ 0.92
HDAC1-201ENST00000373548 SMIM35A0A1B0GVV1 85 aa20.82■□□□□ 0.92
HDAC1-201ENST00000373548 GOLGA6BA6NDN3 693 aa20.82■□□□□ 0.92
HDAC1-201ENST00000373548 PHF2O75151 1096 aa20.82■□□□□ 0.92
HDAC1-201ENST00000373548 GJB6O95452 261 aa20.82■□□□□ 0.92
HDAC1-201ENST00000373548 SLC10A3P09131 477 aa20.82■□□□□ 0.92
HDAC1-201ENST00000373548 CYP2C9P11712 490 aa20.82■□□□□ 0.92
HDAC1-201ENST00000373548 POLR2BP30876 1174 aaKnown RBP20.82■□□□□ 0.92
HDAC1-201ENST00000373548 ATICP31939 592 aa20.82■□□□□ 0.92
HDAC1-201ENST00000373548 RGS2P41220 211 aa20.82■□□□□ 0.92
HDAC1-201ENST00000373548 HLTFQ14527 1009 aaKnown RBP eCLIP20.82■□□□□ 0.929e-7■□□□□ 8.3
HDAC1-201ENST00000373548 TMEM35BQ8NCS4 154 aa20.82■□□□□ 0.92
HDAC1-201ENST00000373548 TRIM51Q9BSJ1 452 aa20.82■□□□□ 0.92
HDAC1-201ENST00000373548 PARVAQ9NVD7 372 aa20.82■□□□□ 0.92
HDAC1-201ENST00000373548 FAN1Q9Y2M0 1017 aa20.82■□□□□ 0.92
HDAC1-201ENST00000373548 C2CD2Q9Y426 696 aa20.82■□□□□ 0.92
HDAC1-201ENST00000373548 HAS3O00219 553 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 DAPK3O43293 454 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 IGHA2P01877 340 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 PSEN2P49810 448 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 RAD23BP54727 409 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 ADAM17P78536 824 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 LACTBP83111 547 aaPredicted RBP20.81■□□□□ 0.92
HDAC1-201ENST00000373548 DR1Q01658 176 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 SIX1Q15475 284 aaPredicted RBP20.81■□□□□ 0.92
HDAC1-201ENST00000373548 DCAF4L1Q3SXM0 396 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 DAB2IPQ5VWQ8 1189 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 MREGQ8N565 214 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 RIN2Q8WYP3 895 aaPredicted RBP20.81■□□□□ 0.92
HDAC1-201ENST00000373548 APBA2Q99767 749 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 ZNF518BQ9C0D4 1074 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 NEUROG2Q9H2A3 272 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.81■□□□□ 0.92
HDAC1-201ENST00000373548 NPTXRO95502 500 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 CALB1P05937 261 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 EIF4BP23588 611 aaKnown RBP20.81■□□□□ 0.92
HDAC1-201ENST00000373548 GYS2P54840 703 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 FAM193AP78312 1265 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 CDC42EP1Q00587 391 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 FEZF2Q8TBJ5 459 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 C18orf8Q96DM3 657 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 OSMRQ99650 979 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 AGAP1Q9UPQ3 857 aa20.81■□□□□ 0.92
HDAC1-201ENST00000373548 TCRBV5S1A1TA0A578 114 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 TLR3O15455 904 aaKnown RBP20.8■□□□□ 0.92
HDAC1-201ENST00000373548 CD19P15391 556 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 CPT1AP50416 773 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 BEX3Q00994 111 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 DHX34Q14147 1143 aaKnown RBP20.8■□□□□ 0.92
HDAC1-201ENST00000373548 DENND1BQ6P3S1 775 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 CATSPER4Q7RTX7 472 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 MAGOHBQ96A72 148 aaKnown RBP20.8■□□□□ 0.92
HDAC1-201ENST00000373548 DDX27Q96GQ7 796 aaKnown RBP20.8■□□□□ 0.92
HDAC1-201ENST00000373548 HPDLQ96IR7 371 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 TWNKQ96RR1 684 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 DPP3Q9NY33 737 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 VPS18Q9P253 973 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 HMGXB4Q9UGU5 601 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 ITGA11Q9UKX5 1188 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 UTP11Q9Y3A2 253 aaKnown RBP20.8■□□□□ 0.92
HDAC1-201ENST00000373548 MYL3P08590 195 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 PAEPP09466 180 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 RARAP10276 462 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 CHRNA3P32297 505 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 RPL7AP62424 266 aaKnown RBP20.8■□□□□ 0.92
HDAC1-201ENST00000373548 CYP1B1Q16678 543 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 TTC27Q6P3X3 843 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 NT5DC4Q86YG4 428 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 SOCS4Q8WXH5 440 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms