RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 SAPCD2Q86UD0 394 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 ERICH1Q86X53 443 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 USP33Q8TEY7 942 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 BARX2Q9UMQ3 279 aaPredicted RBP10.61□□□□□ -0.71
KDM4A-201ENST00000372396 NOVA2Q9UNW9 492 aaKnown RBP10.61□□□□□ -0.71
KDM4A-201ENST00000372396 GMEB1Q9Y692 573 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 RRN3P2A6NIE6 340 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 PDLIM1O00151 329 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 ZC3H11AO75152 810 aaKnown RBP eCLIP10.6□□□□□ -0.717e-6■■■■■ 33.7
KDM4A-201ENST00000372396 IL18RAPO95256 599 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 PGK2P07205 417 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 FAM163BP0C2L3 166 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 ACOT2P49753 483 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 MRPS25P82663 173 aaKnown RBP10.6□□□□□ -0.71
KDM4A-201ENST00000372396 SCARA5Q6ZMJ2 495 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 TRPM8Q7Z2W7 1104 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 IL31RAQ8NI17 732 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 NUDCD1Q96RS6 583 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 KATNAL1Q9BW62 490 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 STRIP2Q9ULQ0 834 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 FZD1Q9UP38 647 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 AGPSO00116 658 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 ADAMTS3O15072 1205 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 GNA15P30679 374 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 CYLC2Q14093 348 aaPredicted RBP10.6□□□□□ -0.71
KDM4A-201ENST00000372396 MEA1Q16626 185 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 LACTB2Q53H82 288 aaPredicted RBP10.6□□□□□ -0.71
KDM4A-201ENST00000372396 KLC3Q6P597 504 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 SIAH1Q8IUQ4 282 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 BEST2Q8NFU1 509 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 BHMTQ93088 406 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 CBWD1Q9BRT8 395 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 BEGAINQ9BUH8 593 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 KIFC3Q9BVG8 833 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 RABL2AQ9UBK7 228 aaPredicted RBP10.6□□□□□ -0.71
KDM4A-201ENST00000372396 PHF24Q9UPV7 400 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 IGLV3-22A0A075B6J6 115 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 ARHGEF37A1IGU5 675 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 CYP26A1O43174 497 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 CAPN15O75808 1086 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 TMEM253P0C7T8 217 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 RRP1BQ14684 758 aaKnown RBP10.6□□□□□ -0.71
KDM4A-201ENST00000372396 DGKDQ16760 1214 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 PHLDB3Q6NSJ2 640 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 EFCAB12Q6NXP0 572 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 NFRKBQ6P4R8 1299 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.6□□□□□ -0.71
KDM4A-201ENST00000372396 ZNF564Q8TBZ8 553 aaPredicted RBP10.6□□□□□ -0.71
KDM4A-201ENST00000372396 EPB41L5Q9HCM4 733 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 NFU1Q9UMS0 254 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 SATB2Q9UPW6 733 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 TRIM43BA6NCK2 446 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 A6NHS1 94 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 MSH2P43246 934 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 GALCP54803 685 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 MTTPP55157 894 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 ATF7IP2Q5U623 682 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 PHLDB2Q86SQ0 1253 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 C7orf31Q8N865 590 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 ATP8B4Q8TF62 1192 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 ARHGEF2Q92974 986 aaKnown RBP10.6□□□□□ -0.71
KDM4A-201ENST00000372396 MED10Q9BTT4 135 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 TARS2Q9BW92 718 aaKnown RBP10.6□□□□□ -0.71
KDM4A-201ENST00000372396 NDEL1Q9GZM8 345 aa10.6□□□□□ -0.71
KDM4A-201ENST00000372396 MAGEA13PA6NCF6 341 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 NKRFO15226 690 aaKnown RBP eCLIP10.59□□□□□ -0.71
KDM4A-201ENST00000372396 STK10O94804 968 aaKnown RBP10.59□□□□□ -0.71
KDM4A-201ENST00000372396 HLA-DRAP01903 254 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 PBX1P40424 430 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 ZNF131P52739 623 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 CNTN2Q02246 1040 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 ZNF677Q86XU0 584 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 KIF2BQ8N4N8 673 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 GFM2Q969S9 779 aaKnown RBP10.59□□□□□ -0.71
KDM4A-201ENST00000372396 SLC35C1Q96A29 364 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 DHRS1Q96LJ7 313 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 INPP4AQ96PE3 977 aaPredicted RBP10.59□□□□□ -0.71
KDM4A-201ENST00000372396 PIDD1Q9HB75 910 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 VTA1Q9NP79 307 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 AIPL1Q9NZN9 384 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 CIDEBQ9UHD4 219 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 ZNF180Q9UJW8 692 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 ANAPC7Q9UJX3 599 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 SIK3Q9Y2K2 1263 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 SPATA31C2B4DYI2 1134 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 PDHXO00330 501 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 FANCGO15287 622 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 NVLO15381 856 aaKnown RBP10.59□□□□□ -0.71
KDM4A-201ENST00000372396 RASSF2P50749 326 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 CACNA2D1P54289 1103 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 PDE1BQ01064 536 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 CUL1Q13616 776 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 NCOA4Q13772 614 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 KRT81Q14533 505 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 SGSM1Q2NKQ1 1148 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 DENND2CQ68D51 928 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 IRGCQ6NXR0 463 aa10.59□□□□□ -0.71
KDM4A-201ENST00000372396 ADAT2Q7Z6V5 191 aaKnown RBP10.59□□□□□ -0.71
KDM4A-201ENST00000372396 FBXO16Q8IX29 292 aaPredicted RBP10.59□□□□□ -0.71
KDM4A-201ENST00000372396 RNF169Q8NCN4 708 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms