RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 RNF43Q68DV7 783 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 C14orf80Q86SX3 495 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 CABP7Q86V35 215 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 WDR75Q8IWA0 830 aaKnown RBP9.37□□□□□ -0.91
ATG4A-203ENST00000372232 ALDH16A1Q8IZ83 802 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 ADSSL1Q8N142 457 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 TTC8Q8TAM2 541 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 NRG4Q8WWG1 115 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 CCT7Q99832 543 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 PRR14Q9BWN1 585 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 MAGEF1Q9HAY2 307 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 INTS9Q9NV88 658 aaKnown RBP9.37□□□□□ -0.91
ATG4A-203ENST00000372232 ATAD3AQ9NVI7 634 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 TMEM260Q9NX78 707 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 RASAL2Q9UJF2 1139 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 FBXL5Q9UKA1 691 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 CCPG1Q9ULG6 757 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 NR2E3Q9Y5X4 410 aa9.37□□□□□ -0.91
ATG4A-203ENST00000372232 DYTNA2CJ06 578 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 H0Y3Z8 333 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 H7C1D1 291 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 PDE5AO76074 875 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 RHOBTB3O94955 611 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 UBTFL6P0CB48 400 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-203ENST00000372232 PIM1P11309 404 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-203ENST00000372232 PLCG1P19174 1290 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 CXCR5P32302 372 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 ARFIP2P53365 341 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 RASSF7Q02833 373 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 RELAQ04206 551 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 RNASELQ05823 741 aaKnown RBP9.36□□□□□ -0.91
ATG4A-203ENST00000372232 ZNF543Q08ER8 600 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 GIT2Q14161 759 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 WDR72Q3MJ13 1102 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 DEPDC1Q5TB30 811 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 LRRC74BQ6ZQY2 392 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 PODNQ7Z5L7 613 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 TTC30AQ86WT1 665 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 ZBED8Q8IZ13 594 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 ST13P4Q8IZP2 240 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-203ENST00000372232 ANKLE1Q8NAG6 615 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 FLAD1Q8NFF5 587 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 UBLCP1Q8WVY7 318 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-203ENST00000372232 COA7Q96BR5 231 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 PRMT1Q99873 361 aaKnown RBP9.36□□□□□ -0.91
ATG4A-203ENST00000372232 SLC4A5Q9BY07 1137 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 GBA3Q9H227 469 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 TMPRSS4Q9NRS4 437 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 ADAMTS1Q9UHI8 967 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 CD2APQ9Y5K6 639 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 FOCADQ5VW36 1801 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 KCNJ18B7U540 433 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 E9PBE3 544 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 CBFA2T3O75081 653 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 OXSR1O95747 527 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-203ENST00000372232 HLA-DOAP06340 250 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 ZCCHC18P0CG32 403 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 COL6A2P12110 1019 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 HOXB1P14653 301 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-203ENST00000372232 NOS2P35228 1153 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 TECP42680 631 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 CRKP46108 304 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 ADCY7P51828 1080 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 ERVK-9P63128 1117 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 NFIAQ12857 509 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 KCNJ12Q14500 433 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 LRRC8BQ6P9F7 803 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 KLHL35Q6PF15 583 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 B3GNT6Q6ZMB0 384 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 TRIM67Q6ZTA4 783 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 NUP93Q8N1F7 819 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 BBS5Q8N3I7 341 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 GIMAP8Q8ND71 665 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-203ENST00000372232 PGM2Q96G03 612 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 MTMR9Q96QG7 549 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 KRT12Q99456 494 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 ZNF184Q99676 751 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-203ENST00000372232 DDX50Q9BQ39 737 aaKnown RBP9.36□□□□□ -0.91
ATG4A-203ENST00000372232 TRIM56Q9BRZ2 755 aaKnown RBP9.36□□□□□ -0.91
ATG4A-203ENST00000372232 TLR10Q9BXR5 811 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 JMJD4Q9H9V9 463 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 KCNQ5Q9NR82 932 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 GINM1Q9NU53 330 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.36□□□□□ -0.91
ATG4A-203ENST00000372232 TSC22D4Q9Y3Q8 395 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 NRXN2Q9P2S2 1712 aa9.36□□□□□ -0.91
ATG4A-203ENST00000372232 C10orf71Q711Q0 1435 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 A0A1W2PQC6 194 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 RAD51CO43502 376 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 EDIL3O43854 480 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 LCA5LO95447 670 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 PMS1P54277 932 aaKnown RBP9.35□□□□□ -0.91
ATG4A-203ENST00000372232 PPIDQ08752 370 aaKnown RBP9.35□□□□□ -0.91
ATG4A-203ENST00000372232 TBL3Q12788 808 aaKnown RBP9.35□□□□□ -0.91
ATG4A-203ENST00000372232 ACVR2BQ13705 512 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 HLTFQ14527 1009 aaKnown RBP eCLIP9.35□□□□□ -0.91
ATG4A-203ENST00000372232 CCDC6Q16204 474 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 FXNQ16595 210 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 ZCWPW2Q504Y3 356 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 IRF2BP1Q8IU81 584 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms