RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 CST8O60676 142 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 RBP5P82980 135 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 ARHGAP18Q8N392 663 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 EPS8L3Q8TE67 593 aaKnown RBP25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 INPP5DQ92835 1189 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 MANSC1Q9H8J5 431 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 CD274Q9NZQ7 290 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 SGSM1Q2NKQ1 1148 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 SH3GL3Q99963 347 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 CDH16O75309 829 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 HSD17B3P37058 310 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 RRM2BQ7LG56 351 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 MFN1Q8IWA4 741 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 CRB1P82279 1406 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 CROCC2H7BZ55 1655 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 DCAF6Q58WW2 860 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 ADCK1Q86TW2 530 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 MICALL2Q8IY33 904 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 SRP72O76094 671 aaKnown RBP25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 COILP38432 576 aaPredicted RBP25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 C16orf86Q6ZW13 317 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 DCUN1D1Q96GG9 259 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 PCDHGB4Q9UN71 923 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 DGAT1O75907 488 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 UPP2O95045 317 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 OR9Q1Q8NGQ5 310 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 THAP11Q96EK4 314 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 C17orf80Q9BSJ5 609 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 MAP4P27816 1152 aaKnown RBP25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 CSE1LP55060 971 aaKnown RBP25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 PLOD1Q02809 727 aaPredicted RBP25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 ATG4AQ8WYN0 398 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 KCNB2Q92953 911 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 SENP1Q9P0U3 644 aa25.04■■□□□ 1.6
RAPGEF1-203ENST00000372195 SGPL1O95470 568 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 SYTL3Q4VX76 610 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 SEPT5Q99719 369 aaPredicted RBP25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 CXorf56Q9H5V9 222 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 SPHKAPQ2M3C7 1700 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 CASP4P49662 377 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 XKR3Q5GH77 459 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 MUC3BQ9H195 1237 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 DYNC1LI2O43237 492 aaPredicted RBP25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 IRAK1P51617 712 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 NPEPPSP55786 919 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 DNAJC3Q13217 504 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 MED21Q13503 144 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 CNBD2Q96M20 576 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 ISCUQ9H1K1 167 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 RSPH10B2B2RC85 870 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 RSPH10BP0C881 870 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 PACSIN1Q9BY11 444 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 IQGAP3Q86VI3 1631 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 OCM2P0CE71 109 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 OCMP0CE72 109 aaPredicted RBP25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 PLA2G4AP47712 749 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 FAM162AQ96A26 154 aa25.03■■□□□ 1.6
RAPGEF1-203ENST00000372195 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.03■■□□□ 1.62e-8■■■■■ 28.8
RAPGEF1-203ENST00000372195 CAND2O75155 1236 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 PLIN5Q00G26 463 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 SNX31Q8N9S9 440 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 SGF29Q96ES7 293 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 ERP44Q9BS26 406 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 RUSC1Q9BVN2 902 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 PKD2L2Q9NZM6 624 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 TRPC1P48995 793 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 TRIP10Q15642 601 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 TMEM161AQ9NX61 479 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 CLCA2Q9UQC9 943 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 PTGISQ16647 500 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 ADCK2Q7Z695 626 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 AKT1P31749 480 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 MRPS15P82914 257 aaKnown RBP25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 EN1Q05925 392 aaPredicted RBP25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 ATF7IP2Q5U623 682 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 AGGF1Q8N302 714 aaeCLIP25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 APOL5Q9BWW9 433 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 KDM4CQ9H3R0 1056 aa25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 FARP1Q9Y4F1 1045 aaPredicted RBP25.02■■□□□ 1.6
RAPGEF1-203ENST00000372195 NDUFS3O75489 264 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 KLRK1P26718 216 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 FUT11Q495W5 492 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 C1orf131Q8NDD1 294 aaKnown RBP25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 A0A1W2PQJ5 194 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 TADA2AO75478 443 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 ASB14A6NK59 587 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 EFCAB12Q6NXP0 572 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 LRRC34Q8IZ02 419 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 SPIRE2Q8WWL2 714 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 PKP3Q9Y446 797 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 GPD1P21695 349 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 COG2Q14746 738 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 C16orf89Q6UX73 402 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 REXO1L1PQ8IX06 675 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 TTC39CQ8N584 583 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 KLC1Q07866 573 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 MFSD14CQ5VZR4 134 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 TPCN2Q8NHX9 752 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 TMEM8AQ9HCN3 771 aa25.01■■□□□ 1.59
RAPGEF1-203ENST00000372195 MAP3K20Q9NYL2 800 aaKnown RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms