RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 COQ4Q9Y3A0 265 aa18.1■□□□□ 0.49
VEGFA-205ENST00000372067 MYPNQ86TC9 1320 aa18.1■□□□□ 0.49
VEGFA-205ENST00000372067 RGS16O15492 202 aaPredicted RBP18.1■□□□□ 0.49
VEGFA-205ENST00000372067 PPFIA2O75334 1257 aa18.1■□□□□ 0.49
VEGFA-205ENST00000372067 TOM1L1O75674 476 aa18.1■□□□□ 0.49
VEGFA-205ENST00000372067 UPP2O95045 317 aa18.1■□□□□ 0.49
VEGFA-205ENST00000372067 DYNLT1P63172 113 aa18.1■□□□□ 0.49
VEGFA-205ENST00000372067 CAPN12Q6ZSI9 719 aa18.1■□□□□ 0.49
VEGFA-205ENST00000372067 DPP9Q86TI2 863 aa18.1■□□□□ 0.49
VEGFA-205ENST00000372067 C1orf131Q8NDD1 294 aaKnown RBP18.1■□□□□ 0.49
VEGFA-205ENST00000372067 FBXL18Q96ME1 805 aa18.1■□□□□ 0.49
VEGFA-205ENST00000372067 APOBEC3GQ9HC16 384 aaKnown RBP18.1■□□□□ 0.49
VEGFA-205ENST00000372067 AGTPBP1Q9UPW5 1226 aa18.1■□□□□ 0.49
VEGFA-205ENST00000372067 HMGB1P1B2RPK0 211 aaPredicted RBP18.09■□□□□ 0.49
VEGFA-205ENST00000372067 KRT1P04264 644 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 COILP38432 576 aaPredicted RBP18.09■□□□□ 0.49
VEGFA-205ENST00000372067 KRT17Q04695 432 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 NOL9Q5SY16 702 aaKnown RBP18.09■□□□□ 0.49
VEGFA-205ENST00000372067 NLRP7Q8WX94 980 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 A0A1B0GVG6 124 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 B4GALT5O43286 388 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 ZC3H11AO75152 810 aaKnown RBP eCLIP18.09■□□□□ 0.494e-14■■■■■ 46.5
VEGFA-205ENST00000372067 SLC25A27O95847 323 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 CST3P01034 146 aaPredicted RBP18.09■□□□□ 0.49
VEGFA-205ENST00000372067 CYP1A2P05177 515 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 EZRP15311 586 aaKnown RBP18.09■□□□□ 0.49
VEGFA-205ENST00000372067 WDR72Q3MJ13 1102 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 CYP4A22Q5TCH4 519 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 ATF7IP2Q5U623 682 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 CCDC125Q86Z20 511 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 C4BPAP04003 597 aaKnown RBP18.09■□□□□ 0.49
VEGFA-205ENST00000372067 ARL2P36404 184 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 HOOK3Q86VS8 718 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 MORC4Q8TE76 937 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 EZH1Q92800 747 aaPredicted RBP18.09■□□□□ 0.49
VEGFA-205ENST00000372067 PCYT2Q99447 389 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 FAM49AQ9H0Q0 323 aaPredicted RBP18.09■□□□□ 0.49
VEGFA-205ENST00000372067 PARP2Q9UGN5 583 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 ZNF148Q9UQR1 794 aa18.09■□□□□ 0.49
VEGFA-205ENST00000372067 A0A0B4J269 797 aa18.08■□□□□ 0.49
VEGFA-205ENST00000372067 PODXLO00592 558 aa18.08■□□□□ 0.49
VEGFA-205ENST00000372067 KIAA0391O15091 583 aaKnown RBP18.08■□□□□ 0.49
VEGFA-205ENST00000372067 ATF2P15336 505 aa18.08■□□□□ 0.49
VEGFA-205ENST00000372067 RAP1GAPP47736 663 aa18.08■□□□□ 0.49
VEGFA-205ENST00000372067 SEC24CP53992 1094 aa18.08■□□□□ 0.49
VEGFA-205ENST00000372067 MXD4Q14582 209 aaPredicted RBP18.08■□□□□ 0.49
VEGFA-205ENST00000372067 TMEM63BQ5T3F8 832 aa18.08■□□□□ 0.49
VEGFA-205ENST00000372067 ERICH1Q86X53 443 aa18.08■□□□□ 0.49
VEGFA-205ENST00000372067 YIPF3Q9GZM5 350 aa18.08■□□□□ 0.49
VEGFA-205ENST00000372067 PIK3R2O00459 728 aa18.08■□□□□ 0.48
VEGFA-205ENST00000372067 OGTO15294 1046 aa18.08■□□□□ 0.48
VEGFA-205ENST00000372067 VNN1O95497 513 aa18.08■□□□□ 0.48
VEGFA-205ENST00000372067 RALAP11233 206 aa18.08■□□□□ 0.48
VEGFA-205ENST00000372067 ICAM3P32942 547 aa18.08■□□□□ 0.48
VEGFA-205ENST00000372067 RPL21P46778 160 aaKnown RBP18.08■□□□□ 0.48
VEGFA-205ENST00000372067 TMC3Q7Z5M5 1100 aa18.08■□□□□ 0.48
VEGFA-205ENST00000372067 MGARPQ8TDB4 240 aa18.08■□□□□ 0.48
VEGFA-205ENST00000372067 HAPLN2Q9GZV7 340 aa18.08■□□□□ 0.48
VEGFA-205ENST00000372067 KDM4CQ9H3R0 1056 aa18.08■□□□□ 0.48
VEGFA-205ENST00000372067 PCDHA3Q9Y5H8 950 aa18.08■□□□□ 0.48
VEGFA-205ENST00000372067 LRRD1A4D1F6 860 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 SMNDC1O75940 238 aaKnown RBP eCLIP18.07■□□□□ 0.484e-7■■□□□ 12.8
VEGFA-205ENST00000372067 MYBL1P10243 752 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 GPR162Q16538 588 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 GPAT2Q6NUI2 795 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 FASTKD5Q7L8L6 764 aaKnown RBP18.07■□□□□ 0.48
VEGFA-205ENST00000372067 MCEEQ96PE7 176 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 APOL6Q9BWW8 343 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 SMARCAD1Q9H4L7 1026 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 ZWILCHQ9H900 591 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 CXCL8P10145 99 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 TGFB3P10600 412 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 TMEM62Q0P6H9 643 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 SH3D19Q5HYK7 790 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 ZNF667Q5HYK9 610 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 YTHDF3Q7Z739 585 aaKnown RBP18.07■□□□□ 0.48
VEGFA-205ENST00000372067 ABRAQ8N0Z2 381 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 TMEM35BQ8NCS4 154 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 EPAS1Q99814 870 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 PDLIM7Q9NR12 457 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 HAUS2Q9NVX0 235 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 MAFO75444 373 aaPredicted RBP18.07■□□□□ 0.48
VEGFA-205ENST00000372067 ADCY1Q08828 1119 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 ZNF844Q08AG5 666 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 EEF1DP3Q658K8 133 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 CAPRIN2Q6IMN6 1127 aaKnown RBP18.07■□□□□ 0.48
VEGFA-205ENST00000372067 MAGEC3Q8TD91 643 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 ZNF606Q8WXB4 792 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 KCNK9Q9NPC2 374 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 CISHQ9NSE2 258 aa18.07■□□□□ 0.48
VEGFA-205ENST00000372067 VTNP04004 478 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 EPHX2P34913 555 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 SLC29A2Q14542 456 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 CCDC38Q502W7 563 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 HP1BP3Q5SSJ5 553 aaPredicted RBP18.06■□□□□ 0.48
VEGFA-205ENST00000372067 TTC27Q6P3X3 843 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 CRELD2Q6UXH1 353 aaPredicted RBP18.06■□□□□ 0.48
VEGFA-205ENST00000372067 CPLX4Q7Z7G2 160 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 RHOT1Q8IXI2 618 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 C2orf40Q9H1Z8 148 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms