RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 TNFSF13BQ9Y275 285 aa16.44■□□□□ 0.22
RPF1-202ENST00000370656 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.44■□□□□ 0.22
RPF1-202ENST00000370656 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.43■□□□□ 0.22
RPF1-202ENST00000370656 RPL9P32969 192 aaKnown RBP16.43■□□□□ 0.22
RPF1-202ENST00000370656 CLCN6P51797 869 aa16.43■□□□□ 0.22
RPF1-202ENST00000370656 NDUFA8P51970 172 aa16.43■□□□□ 0.22
RPF1-202ENST00000370656 ZNF280DQ6N043 979 aa16.43■□□□□ 0.22
RPF1-202ENST00000370656 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.43■□□□□ 0.22
RPF1-202ENST00000370656 MFSD6LQ8IWD5 586 aa16.43■□□□□ 0.22
RPF1-202ENST00000370656 YAF2Q8IY57 180 aa16.43■□□□□ 0.22
RPF1-202ENST00000370656 SPEM1Q8N4L4 309 aa16.43■□□□□ 0.22
RPF1-202ENST00000370656 APPL2Q8NEU8 664 aa16.43■□□□□ 0.22
RPF1-202ENST00000370656 DDX1Q92499 740 aaKnown RBP16.43■□□□□ 0.22
RPF1-202ENST00000370656 CLIC6Q96NY7 704 aa16.43■□□□□ 0.22
RPF1-202ENST00000370656 KIFC3Q9BVG8 833 aa16.43■□□□□ 0.22
RPF1-202ENST00000370656 TMEM60Q9H2L4 133 aa16.43■□□□□ 0.22
RPF1-202ENST00000370656 SLITRK6Q9H5Y7 841 aa16.43■□□□□ 0.22
RPF1-202ENST00000370656 SEMA4GQ9NTN9 838 aa16.43■□□□□ 0.22
RPF1-202ENST00000370656 AFF4Q9UHB7 1163 aaKnown RBP16.43■□□□□ 0.22
RPF1-202ENST00000370656 FBXL5Q9UKA1 691 aa16.43■□□□□ 0.22
RPF1-202ENST00000370656 CHD6Q8TD26 2715 aa16.43■□□□□ 0.22
RPF1-202ENST00000370656 PHLPP2Q6ZVD8 1323 aa16.43■□□□□ 0.22
RPF1-202ENST00000370656 A0A1B0GVL5 298 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 SEC24AO95486 1093 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 MYL4P12829 197 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 PFKFB1P16118 471 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 CCNE1P24864 410 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 LONP1P36776 959 aaKnown RBP16.42■□□□□ 0.22
RPF1-202ENST00000370656 CCR2P41597 374 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 OSTNP61366 133 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 GRIN1Q05586 938 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 SOX4Q06945 474 aaPredicted RBP16.42■□□□□ 0.22
RPF1-202ENST00000370656 CSRP2Q16527 193 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 IL17AQ16552 155 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 ZNF568Q3ZCX4 644 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 XKR4Q5GH76 650 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 LRSAM1Q6UWE0 723 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 ALKAL1Q6UXT8 129 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 ZSCAN18Q8TBC5 510 aaPredicted RBP16.42■□□□□ 0.22
RPF1-202ENST00000370656 ACAP3Q96P50 834 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 TRPV4Q9HBA0 871 aa16.42■□□□□ 0.22
RPF1-202ENST00000370656 USP24Q9UPU5 2620 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 CCDC169A6NNP5 214 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 OR52Z1P0C646 297 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 CHRNB1P11230 501 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 CPB1P15086 417 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 KCNE1P15382 129 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 VIPR2P41587 438 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 SATB1Q01826 763 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 TWF1Q12792 350 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 MRPL58Q14197 206 aaKnown RBP16.41■□□□□ 0.22
RPF1-202ENST00000370656 PRR23CQ6ZRP0 262 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 LONP2Q86WA8 852 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 FAM200AQ8TCP9 573 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 ZSWIM3Q96MP5 696 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 ACO2Q99798 780 aaKnown RBP16.41■□□□□ 0.22
RPF1-202ENST00000370656 TCHPQ9BT92 498 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 FUCA2Q9BTY2 467 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 MRPL4Q9BYD3 311 aaKnown RBP16.41■□□□□ 0.22
RPF1-202ENST00000370656 NUP62CLQ9H1M0 184 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 CDT1Q9H211 546 aa16.41■□□□□ 0.22
RPF1-202ENST00000370656 C8orf33Q9H7E9 229 aaPredicted RBP16.41■□□□□ 0.22
RPF1-202ENST00000370656 CNOT1A5YKK6 2376 aaKnown RBP16.41■□□□□ 0.22
RPF1-202ENST00000370656 HEPACAM2A8MVW5 462 aa16.4■□□□□ 0.22
RPF1-202ENST00000370656 ZNF202O95125 648 aa16.4■□□□□ 0.22
RPF1-202ENST00000370656 MCF2P10911 925 aa16.4■□□□□ 0.22
RPF1-202ENST00000370656 CCT6AP40227 531 aaKnown RBP16.4■□□□□ 0.22
RPF1-202ENST00000370656 KPNA1P52294 538 aaPredicted RBP16.4■□□□□ 0.22
RPF1-202ENST00000370656 EPHA5P54756 1037 aa16.4■□□□□ 0.22
RPF1-202ENST00000370656 PLD1Q13393 1074 aa16.4■□□□□ 0.22
RPF1-202ENST00000370656 HS6ST3Q8IZP7 471 aa16.4■□□□□ 0.22
RPF1-202ENST00000370656 CEP120Q8N960 986 aa16.4■□□□□ 0.22
RPF1-202ENST00000370656 SUSD3Q96L08 255 aa16.4■□□□□ 0.22
RPF1-202ENST00000370656 BHMT2Q9H2M3 363 aa16.4■□□□□ 0.22
RPF1-202ENST00000370656 TMEM134Q9H6X4 195 aa16.4■□□□□ 0.22
RPF1-202ENST00000370656 CEP72Q9P209 647 aa16.4■□□□□ 0.22
RPF1-202ENST00000370656 CFAP47Q6ZTR5 3102 aa16.4■□□□□ 0.22
RPF1-202ENST00000370656 SPAG17Q6Q759 2223 aa16.39■□□□□ 0.22
RPF1-202ENST00000370656 CHURC1-FNTBB4DL54 471 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 CHADO15335 359 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 PAPSS2O95340 614 aaPredicted RBP16.39■□□□□ 0.21
RPF1-202ENST00000370656 SYKP43405 635 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 FNTBP49356 437 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 DMP1Q13316 513 aaPredicted RBP16.39■□□□□ 0.21
RPF1-202ENST00000370656 TEAD2Q15562 447 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 DGKKQ5KSL6 1271 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 DTHD1Q6ZMT9 781 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 CEP68Q76N32 757 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 GAS2L3Q86XJ1 694 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 DDX12PQ92771 950 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 AK8Q96MA6 479 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 ZMAT2Q96NC0 199 aaKnown RBP16.39■□□□□ 0.21
RPF1-202ENST00000370656 OXCT2Q9BYC2 517 aaPredicted RBP16.39■□□□□ 0.21
RPF1-202ENST00000370656 POLD4Q9HCU8 107 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 PTPRHQ9HD43 1115 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 FAM13BQ9NYF5 915 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 CNTN3Q9P232 1028 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 USP25Q9UHP3 1055 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 STK24Q9Y6E0 443 aa16.39■□□□□ 0.21
RPF1-202ENST00000370656 GREB1Q4ZG55 1949 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms