RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 GTPBP10A4D1E9 387 aaKnown RBP16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 GOLGA6L19H0YKK7 550 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 CXCL14O95715 111 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 TKTP29401 623 aaKnown RBP16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 TNNC1P63316 161 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 PTPN14Q15678 1187 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 WDR44Q5JSH3 913 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 RTP2Q5QGT7 225 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 SCARA3Q6AZY7 606 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 Q7L0L9 218 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 METTL23Q86XA0 190 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 TMEM86AQ8N2M4 240 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 CDX2Q99626 313 aaPredicted RBP16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 NDST4Q9H3R1 872 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 MTMR10Q9NXD2 777 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 LIMA1Q9UHB6 759 aaKnown RBP16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 LRRC10BA6NIK2 292 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 H7C4K7 107 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 LILRB3O75022 631 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 CLSTN1O94985 981 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 OAZ2O95190 189 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 IRS1P35568 1242 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 YWHAHQ04917 246 aaPredicted RBP16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 KRT31Q15323 416 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 VARS2Q5ST30 1063 aaKnown RBP16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 PLPP4Q5VZY2 271 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 LIMS2Q7Z4I7 341 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 LUZP1Q86V48 1076 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 RIN2Q8WYP3 895 aaPredicted RBP16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 EMILIN2Q9BXX0 1053 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 RXFP1Q9HBX9 757 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 FNIP2Q9P278 1114 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 BACE2Q9Y5Z0 518 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 MTCH2Q9Y6C9 303 aa16.68■□□□□ 0.26
PRPF38B-202ENST00000370022 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.67■□□□□ 0.26
PRPF38B-202ENST00000370022 FSD2A1L4K1 749 aa16.67■□□□□ 0.26
PRPF38B-202ENST00000370022 C2orf71A6NGG8 1288 aa16.67■□□□□ 0.26
PRPF38B-202ENST00000370022 NOP14P78316 857 aaKnown RBP16.67■□□□□ 0.26
PRPF38B-202ENST00000370022 MRPL58Q14197 206 aaKnown RBP16.67■□□□□ 0.26
PRPF38B-202ENST00000370022 ADGRE1Q14246 886 aa16.67■□□□□ 0.26
PRPF38B-202ENST00000370022 MIIPQ5JXC2 388 aa16.67■□□□□ 0.26
PRPF38B-202ENST00000370022 ZNF280DQ6N043 979 aa16.67■□□□□ 0.26
PRPF38B-202ENST00000370022 LNX1Q8TBB1 728 aaPredicted RBP16.67■□□□□ 0.26
PRPF38B-202ENST00000370022 B3GALT6Q96L58 329 aa16.67■□□□□ 0.26
PRPF38B-202ENST00000370022 GUCD1Q96NT3 240 aa16.67■□□□□ 0.26
PRPF38B-202ENST00000370022 MMS19Q96T76 1030 aa16.67■□□□□ 0.26
PRPF38B-202ENST00000370022 NSUN3Q9H649 340 aaKnown RBP16.67■□□□□ 0.26
PRPF38B-202ENST00000370022 MTRRQ9UBK8 725 aa16.67■□□□□ 0.26
PRPF38B-202ENST00000370022 CHD9Q3L8U1 2897 aa16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 C2CD2LO14523 706 aa16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 TACC1O75410 805 aa16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 IGFBP4P22692 258 aa16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 CA8P35219 290 aa16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 PSMD5Q16401 504 aa16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 SOWAHAQ2M3V2 549 aa16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 OVOS1Q6IE37 1185 aa16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 THEM5Q8N1Q8 247 aa16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 PDCL2Q8N4E4 241 aa16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 SEMA4DQ92854 862 aa16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 CDCA3Q99618 268 aaPredicted RBP16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 FAM124BQ9H5Z6 455 aaPredicted RBP16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 NXF1Q9UBU9 619 aaKnown RBP16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 L1RE1Q9UN81 338 aa16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 SCN1AP35498 2009 aa16.66■□□□□ 0.26
PRPF38B-202ENST00000370022 HIDE1A8MVS5 230 aa16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 C1RP00736 705 aa16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 LHX1P48742 406 aa16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 NDUFV1P49821 464 aa16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 FKBP15Q5T1M5 1219 aa16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 WSCD1Q658N2 575 aa16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 GBP6Q6ZN66 633 aa16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 ADGRF2Q8IZF7 708 aa16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 EHBP1Q8NDI1 1231 aa16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 MYLIPQ8WY64 445 aa16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 PI4K2AQ9BTU6 479 aa16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 NIF3L1Q9GZT8 377 aa16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 CYP3A43Q9HB55 503 aa16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 TAB2Q9NYJ8 693 aa16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 TIMM13Q9Y5L4 95 aaPredicted RBP16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 CDH23Q9H251 3354 aa16.65■□□□□ 0.26
PRPF38B-202ENST00000370022 OR6C75A6NL08 312 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 PES1O00541 588 aaKnown RBP16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 CSPG5O95196 566 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 ADH1AP07327 375 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 ATP1A3P13637 1013 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 FOSL2P15408 326 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 COPB1P53618 953 aaKnown RBP16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 EXOC3L4Q17RC7 722 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 CTXN3Q4LDR2 81 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 SLC8B1Q6J4K2 584 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 PRSS55Q6UWB4 352 aaPredicted RBP16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 PPFIBP1Q86W92 1011 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 TTC39CQ8N584 583 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 LMO3Q8TAP4 145 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 AUTS2Q8WXX7 1259 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 FAM81BQ96LP2 452 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 NT5C1BQ96P26 610 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 KLHL5Q96PQ7 755 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 VPS16Q9H269 839 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 APOBEC3GQ9HC16 384 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms