RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 CSTF3Q12996 717 aaKnown RBP16.47■□□□□ 0.23
PRDM1-203ENST00000369096 MTM1Q13496 603 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 TBC1D10CQ8IV04 446 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 RTKN2Q8IZC4 609 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 SIKE1Q9BRV8 207 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 AGAP1Q9UPQ3 857 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 CFAP99D6REC4 459 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 FOXP2O15409 715 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 RARBP10826 455 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 FCER1AP12319 257 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 PRDX5P30044 214 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 IRX1P78414 480 aaPredicted RBP16.47■□□□□ 0.23
PRDM1-203ENST00000369096 PTK7Q13308 1070 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 CCDC149Q6ZUS6 474 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 SYDE1Q6ZW31 735 aaPredicted RBP16.47■□□□□ 0.23
PRDM1-203ENST00000369096 RERGLQ9H628 205 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 CAPN10Q9HC96 672 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 RIC8BQ9NVN3 520 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 DLGAP2Q9P1A6 1054 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 SNX12Q9UMY4 172 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 NBPF26B4DH59 902 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 PSMD3O43242 534 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 TRAPPC3O43617 180 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 NMT2O60551 498 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 HS6ST3Q8IZP7 471 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 NBPF15Q8N660 670 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 TTLL6Q8N841 843 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 PIK3R5Q8WYR1 880 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 BPIFA3Q9BQP9 254 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 RPAP3Q9H6T3 665 aaPredicted RBP16.47■□□□□ 0.23
PRDM1-203ENST00000369096 QTRT2Q9H974 415 aaKnown RBP16.47■□□□□ 0.23
PRDM1-203ENST00000369096 RAD18Q9NS91 495 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 BSDC1Q9NW68 430 aaPredicted RBP16.47■□□□□ 0.23
PRDM1-203ENST00000369096 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.47■□□□□ 0.23
PRDM1-203ENST00000369096 SRP68Q9UHB9 627 aaKnown RBP16.47■□□□□ 0.23
PRDM1-203ENST00000369096 LOC102724159A0A0B4J2E5 919 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 TDP2O95551 362 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 WEE2P0C1S8 567 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 CPA2P48052 419 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 MTF1Q14872 753 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 PWP2Q15269 919 aaKnown RBP16.46■□□□□ 0.23
PRDM1-203ENST00000369096 SRLQ86TD4 932 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.46■□□□□ 0.23
PRDM1-203ENST00000369096 HIC2Q96JB3 615 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 WDR24Q96S15 920 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 A0A1W2PQC6 194 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 C21orf2O43822 256 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 APOA4P06727 396 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 ITIH2P19823 946 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 QRICH1Q2TAL8 776 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 C10orf53Q8N6V4 93 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 ARHGEF26Q96DR7 871 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 XPO6Q96QU8 1125 aaKnown RBP16.46■□□□□ 0.23
PRDM1-203ENST00000369096 GINS4Q9BRT9 223 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 ZNF185O15231 689 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 STRNO43815 780 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 USP39Q53GS9 565 aaKnown RBP16.46■□□□□ 0.23
PRDM1-203ENST00000369096 JADE3Q92613 823 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 MS4A14Q96JA4 679 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 ECSITQ9BQ95 431 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 EIF2AK1Q9BQI3 630 aaKnown RBP16.46■□□□□ 0.23
PRDM1-203ENST00000369096 MRGBPQ9NV56 204 aa16.46■□□□□ 0.23
PRDM1-203ENST00000369096 PIN4Q9Y237 131 aaKnown RBP16.46■□□□□ 0.23
PRDM1-203ENST00000369096 STK36Q9NRP7 1315 aa16.46■□□□□ 0.22
PRDM1-203ENST00000369096 MLNP12872 115 aa16.46■□□□□ 0.22
PRDM1-203ENST00000369096 CCND1P24385 295 aa16.46■□□□□ 0.22
PRDM1-203ENST00000369096 PTPN7P35236 360 aa16.46■□□□□ 0.22
PRDM1-203ENST00000369096 PPP1R18Q6NYC8 613 aa16.46■□□□□ 0.22
PRDM1-203ENST00000369096 SLC25A41Q8N5S1 370 aa16.46■□□□□ 0.22
PRDM1-203ENST00000369096 PPP1R14AQ96A00 147 aa16.46■□□□□ 0.22
PRDM1-203ENST00000369096 SPATA16Q9BXB7 569 aa16.46■□□□□ 0.22
PRDM1-203ENST00000369096 RHBDL2Q9NX52 303 aa16.46■□□□□ 0.22
PRDM1-203ENST00000369096 NEDD4P46934 1319 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 PRKCQQ04759 706 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 KRT77Q7Z794 578 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 CPA5Q8WXQ8 436 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 ARHGEF3Q9NR81 526 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 MTO1Q9Y2Z2 717 aaKnown RBP16.45■□□□□ 0.22
PRDM1-203ENST00000369096 PCDHA10Q9Y5I2 948 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 ZC3H13Q5T200 1668 aaKnown RBP16.45■□□□□ 0.22
PRDM1-203ENST00000369096 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
PRDM1-203ENST00000369096 ALFQ53S48 1182 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 DAB2IPQ5VWQ8 1189 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 TRPM8Q7Z2W7 1104 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 HEATR4Q86WZ0 1026 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 PAPOLBQ9NRJ5 636 aaKnown RBP16.45■□□□□ 0.22
PRDM1-203ENST00000369096 GTF2A1LQ9UNN4 478 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 CHRM3P20309 590 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 C4BPBP20851 252 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 NMT1P30419 496 aaKnown RBP16.45■□□□□ 0.22
PRDM1-203ENST00000369096 PRIM2P49643 509 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 EFNA5P52803 228 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 FRMD5Q7Z6J6 570 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 THUMPD3Q9BV44 507 aaKnown RBP16.45■□□□□ 0.22
PRDM1-203ENST00000369096 TMEM117Q9H0C3 514 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 WDR35Q9P2L0 1181 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 ERVV-1B6SEH8 477 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 ZBTB39O15060 712 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 PHF2O75151 1096 aa16.45■□□□□ 0.22
PRDM1-203ENST00000369096 PRPF39Q86UA1 669 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms