RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 TMEM143Q96AN5 459 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 CASD1Q96PB1 797 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 TCF25Q9BQ70 676 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 CBWD1Q9BRT8 395 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 INO80BQ9C086 356 aaPredicted RBP9.49□□□□□ -0.89
SNX27-201ENST00000368838 FAM124BQ9H5Z6 455 aaPredicted RBP9.49□□□□□ -0.89
SNX27-201ENST00000368838 IFT122Q9HBG6 1241 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 AAASQ9NRG9 546 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 ZNHIT6Q9NWK9 470 aaKnown RBP9.49□□□□□ -0.89
SNX27-201ENST00000368838 PCDHGC3Q9UN70 934 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 BZW2Q9Y6E2 419 aaKnown RBP9.49□□□□□ -0.89
SNX27-201ENST00000368838 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.48□□□□□ -0.89
SNX27-201ENST00000368838 ZNF233A6NK53 670 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 ANKRD63C9JTQ0 380 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 CLIC2O15247 247 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 ZSCAN12O43309 604 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 FAM189A1O60320 539 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 NOL4O94818 638 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 LAG3P18627 525 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 EIF4BP23588 611 aaKnown RBP9.48□□□□□ -0.89
SNX27-201ENST00000368838 LIG4P49917 911 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 LRMPQ12912 555 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 NOLC1Q14978 699 aaKnown RBP eCLIP9.48□□□□□ -0.89
SNX27-201ENST00000368838 DUSP6Q16828 381 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 EXOC3L4Q17RC7 722 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 CEP135Q66GS9 1140 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 KCNT2Q6UVM3 1135 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 MAEAQ7L5Y9 396 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 ECHDC2Q86YB7 292 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 NT5DC4Q86YG4 428 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 NEK11Q8NG66 645 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 LMO3Q8TAP4 145 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 UBE2Q2Q8WVN8 375 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 AUTS2Q8WXX7 1259 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 ZNF558Q96NG5 402 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 POP1Q99575 1024 aaKnown RBP9.48□□□□□ -0.89
SNX27-201ENST00000368838 ACO2Q99798 780 aaKnown RBP9.48□□□□□ -0.89
SNX27-201ENST00000368838 TMEM117Q9H0C3 514 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 GANQ9H2C0 597 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 TMEM8AQ9HCN3 771 aa9.48□□□□□ -0.89
SNX27-201ENST00000368838 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.48□□□□□ -0.89
SNX27-201ENST00000368838 CNTNAP2Q9UHC6 1331 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 A0A087WZ62 844 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 LRRIQ4A6NIV6 560 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 MEIS3P2A8K0S8 358 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 FSCN2O14926 492 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 WEE2P0C1S8 567 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 DARSP14868 501 aaKnown RBP9.47□□□□□ -0.89
SNX27-201ENST00000368838 UCHL3P15374 230 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 ATF7P17544 494 aaPredicted RBP9.47□□□□□ -0.89
SNX27-201ENST00000368838 PON1P27169 355 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 AXLP30530 894 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 UBE3AQ05086 875 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 MBTD1Q05BQ5 628 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 CYP24A1Q07973 514 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 C1orf220Q5T0J3 134 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 KLHDC7AQ5VTJ3 777 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 E4F1Q66K89 784 aaPredicted RBP9.47□□□□□ -0.89
SNX27-201ENST00000368838 KRT39Q6A163 491 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 WDR59Q6PJI9 974 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 ENOSF1Q7L5Y1 443 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 TMC7Q7Z402 723 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 RHPN2Q8IUC4 686 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 BRSK2Q8IWQ3 736 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 CCAR2Q8N163 923 aaKnown RBP9.47□□□□□ -0.89
SNX27-201ENST00000368838 LRRC43Q8N309 656 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 RDH13Q8NBN7 331 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 RNF149Q8NC42 400 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 EHBP1Q8NDI1 1231 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 FEZF2Q8TBJ5 459 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 FDXACB1Q9BRP7 624 aaPredicted RBP9.47□□□□□ -0.89
SNX27-201ENST00000368838 ELAC1Q9H777 363 aaKnown RBP9.47□□□□□ -0.89
SNX27-201ENST00000368838 POLD4Q9HCU8 107 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 AGO2Q9UKV8 859 aaKnown RBP9.47□□□□□ -0.89
SNX27-201ENST00000368838 INPP5FQ9Y2H2 1132 aa9.47□□□□□ -0.89
SNX27-201ENST00000368838 A0A1B0GUA9 196 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 EIF3CLB5ME19 914 aaKnown RBP9.46□□□□□ -0.9
SNX27-201ENST00000368838 LOC730098B7Z3J9 87 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 RNF225M0QZC1 329 aaPredicted RBP9.46□□□□□ -0.9
SNX27-201ENST00000368838 OGTO15294 1046 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 CLDN3O15551 220 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 PRKCBP05771 671 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 CCDC172P0C7W6 258 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 MCF2P10911 925 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 ADKP55263 362 aaKnown RBP9.46□□□□□ -0.9
SNX27-201ENST00000368838 JAM2P57087 298 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 NHLH1Q02575 133 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 ASTE1Q2TB18 679 aaPredicted RBP9.46□□□□□ -0.9
SNX27-201ENST00000368838 PROX2Q3B8N5 592 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 ZACNQ401N2 412 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 TWF2Q6IBS0 349 aaKnown RBP9.46□□□□□ -0.9
SNX27-201ENST00000368838 ANKRD54Q6NXT1 300 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 PDXDC1Q6P996 788 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 SYCE2Q6PIF2 218 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 TRIM65Q6PJ69 517 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 MPZL3Q6UWV2 235 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 CRELD2Q6UXH1 353 aaPredicted RBP9.46□□□□□ -0.9
SNX27-201ENST00000368838 NYAP1Q6ZVC0 841 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 APBB1IPQ7Z5R6 666 aaPredicted RBP9.46□□□□□ -0.9
SNX27-201ENST00000368838 TMEM173Q86WV6 379 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms