RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 UTP14CQ5TAP6 766 aaKnown RBP9.52□□□□□ -0.89
TPM3-213ENST00000368545 FAM160B1Q5W0V3 765 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 OVOS1Q6IE37 1185 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 ANO5Q75V66 913 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 ARMCX2Q7L311 632 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 CREBRFQ8IUR6 639 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 NELFCDQ8IXH7 590 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 TAB3Q8N5C8 712 aaPredicted RBP9.52□□□□□ -0.89
TPM3-213ENST00000368545 MCPH1Q8NEM0 835 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 AFAP1L1Q8TED9 768 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 SCFD2Q8WU76 684 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 CACTINQ8WUQ7 758 aaKnown RBP9.52□□□□□ -0.89
TPM3-213ENST00000368545 EXOC2Q96KP1 924 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 CEP170P1Q96L14 293 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 ZNF830Q96NB3 372 aaPredicted RBP9.52□□□□□ -0.89
TPM3-213ENST00000368545 CLUHP3Q96NS8 147 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 IGFLR1Q9H665 355 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 MLXIPQ9HAP2 919 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 VTA1Q9NP79 307 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 NDFIP2Q9NV92 336 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 MTCH2Q9Y6C9 303 aa9.52□□□□□ -0.89
TPM3-213ENST00000368545 GFRA2O00451 464 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 TSPAN6O43657 245 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 ZNF862O60290 1169 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 DNAJA2O60884 412 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 GHRHP01286 108 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 PLS3P13797 630 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 RPL13P26373 211 aaKnown RBP9.51□□□□□ -0.89
TPM3-213ENST00000368545 ABCD1P33897 745 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 MAN2A1Q16706 1144 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 PLA2G4FQ68DD2 849 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 KIAA1211LQ6NV74 962 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 ZNF720Q7Z2F6 126 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 FBXO16Q8IX29 292 aaPredicted RBP9.51□□□□□ -0.89
TPM3-213ENST00000368545 DAW1Q8N136 415 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 AFAP1L2Q8N4X5 818 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 MSL3Q8N5Y2 521 aaKnown RBP9.51□□□□□ -0.89
TPM3-213ENST00000368545 GOLGA5Q8TBA6 731 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 PHOSPHO2Q8TCD6 241 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 SEPT1Q8WYJ6 367 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 KLHL6Q8WZ60 621 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 KIFAP3Q92845 792 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 RNF166Q96A37 237 aaPredicted RBP9.51□□□□□ -0.89
TPM3-213ENST00000368545 IQCDQ96DY2 449 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 ABHD17AQ96GS6 310 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 FAM167AQ96KS9 214 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 FIZ1Q96SL8 496 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 VPS16Q9H269 839 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 NKX2-4Q9H2Z4 354 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 ST6GALNAC4Q9H4F1 302 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 KCNG1Q9UIX4 513 aa9.51□□□□□ -0.89
TPM3-213ENST00000368545 K7ENM7 598 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 NOP56O00567 594 aaKnown RBP9.5□□□□□ -0.89
TPM3-213ENST00000368545 CETN3O15182 167 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 TEX33O43247 280 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 STBD1O95210 358 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 FGBP02675 491 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 ESRRAP11474 423 aaPredicted RBP9.5□□□□□ -0.89
TPM3-213ENST00000368545 EPHB1P54762 984 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 UBXN1Q04323 297 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 BIRC2Q13490 618 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 CELF3Q5SZQ8 465 aaKnown RBP9.5□□□□□ -0.89
TPM3-213ENST00000368545 FKBP15Q5T1M5 1219 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 MAMDC4Q6UXC1 1216 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 DPP9Q86TI2 863 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 PPFIBP1Q86W92 1011 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 KISS1RQ969F8 398 aaPredicted RBP9.5□□□□□ -0.89
TPM3-213ENST00000368545 HVCN1Q96D96 273 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 TARS2Q9BW92 718 aaKnown RBP9.5□□□□□ -0.89
TPM3-213ENST00000368545 NUCKS1Q9H1E3 243 aaKnown RBP9.5□□□□□ -0.89
TPM3-213ENST00000368545 AZI2Q9H6S1 392 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 BCAS3Q9H6U6 928 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 ATP6V0A4Q9HBG4 840 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 CYP26B1Q9NR63 512 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 CGNQ9P2M7 1197 aaKnown RBP9.5□□□□□ -0.89
TPM3-213ENST00000368545 PES1O00541 588 aaKnown RBP9.5□□□□□ -0.89
TPM3-213ENST00000368545 SLC16A3O15427 465 aaKnown RBP9.5□□□□□ -0.89
TPM3-213ENST00000368545 SMNDC1O75940 238 aaKnown RBP eCLIP9.5□□□□□ -0.89
TPM3-213ENST00000368545 PRPF6O94906 941 aaKnown RBP9.5□□□□□ -0.89
TPM3-213ENST00000368545 SCP2P22307 547 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 NR2F2P24468 414 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 NMT1P30419 496 aaKnown RBP9.5□□□□□ -0.89
TPM3-213ENST00000368545 GNALP38405 381 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 KCNJ6P48051 423 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 DMP1Q13316 513 aaPredicted RBP9.5□□□□□ -0.89
TPM3-213ENST00000368545 ADAM9Q13443 819 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 LY6KQ17RY6 165 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 CCDC40Q4G0X9 1142 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 ZC3H12BQ5HYM0 836 aaKnown RBP9.5□□□□□ -0.89
TPM3-213ENST00000368545 ARMCX5Q6P1M9 558 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 CCDC62Q6P9F0 684 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 CNGA4Q8IV77 575 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 KIAA1524Q8TCG1 905 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 RPS6KC1Q96S38 1066 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 STRA6Q9BX79 667 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 TMEM206Q9H813 350 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 PRDM16Q9HAZ2 1276 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 EMSYQ7Z589 1322 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 ZMYM2Q9UBW7 1377 aa9.5□□□□□ -0.89
TPM3-213ENST00000368545 GSTTP1A0A1W2PQM5 241 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms