RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 PRUNE2Q8WUY3 3088 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 STX10O60499 249 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 VNN1O95497 513 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 GLP2RO95838 553 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 KLRC2P26717 231 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 CA8P35219 290 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 SLC8B1Q6J4K2 584 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 DPH6Q7L8W6 267 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 VN1R2Q8NFZ6 395 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 HLA-CQ95604 372 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 SLC35C1Q96A29 364 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 HPDLQ96IR7 371 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 XYLT2Q9H1B5 865 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 IGFLR1Q9H665 355 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 ANO10Q9NW15 660 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 HCFC2Q9Y5Z7 792 aa20.09■□□□□ 0.81
LMNA-204ENST00000368298 CYB561D2O14569 222 aa20.08■□□□□ 0.81
LMNA-204ENST00000368298 LINC01565O15544 149 aa20.08■□□□□ 0.81
LMNA-204ENST00000368298 PHACTR2O75167 634 aa20.08■□□□□ 0.81
LMNA-204ENST00000368298 TRIM49P0CI25 452 aa20.08■□□□□ 0.81
LMNA-204ENST00000368298 TRIM49CP0CI26 452 aa20.08■□□□□ 0.81
LMNA-204ENST00000368298 LTBRP36941 435 aa20.08■□□□□ 0.81
LMNA-204ENST00000368298 YWHAHQ04917 246 aaPredicted RBP20.08■□□□□ 0.81
LMNA-204ENST00000368298 TRPC3Q13507 836 aa20.08■□□□□ 0.81
LMNA-204ENST00000368298 RAB33AQ14088 237 aa20.08■□□□□ 0.81
LMNA-204ENST00000368298 LILRA6Q6PI73 481 aa20.08■□□□□ 0.81
LMNA-204ENST00000368298 SPATA18Q8TC71 538 aa20.08■□□□□ 0.81
LMNA-204ENST00000368298 PPP1R9BQ96SB3 815 aa20.08■□□□□ 0.81
LMNA-204ENST00000368298 TMEM8AQ9HCN3 771 aa20.08■□□□□ 0.81
LMNA-204ENST00000368298 TSC2P49815 1807 aa20.08■□□□□ 0.8
LMNA-204ENST00000368298 FAM163BP0C2L3 166 aa20.07■□□□□ 0.8
LMNA-204ENST00000368298 RPL17P18621 184 aaKnown RBP20.07■□□□□ 0.8
LMNA-204ENST00000368298 MYL6P60660 151 aa20.07■□□□□ 0.8
LMNA-204ENST00000368298 BIRC3Q13489 604 aa20.07■□□□□ 0.8
LMNA-204ENST00000368298 NCOA4Q13772 614 aa20.07■□□□□ 0.8
LMNA-204ENST00000368298 SKIV2LQ15477 1246 aaKnown RBP20.07■□□□□ 0.8
LMNA-204ENST00000368298 SGSM1Q2NKQ1 1148 aa20.07■□□□□ 0.8
LMNA-204ENST00000368298 ZNF280DQ6N043 979 aa20.07■□□□□ 0.8
LMNA-204ENST00000368298 RSPO2Q6UXX9 243 aaPredicted RBP20.07■□□□□ 0.8
LMNA-204ENST00000368298 TOP6BLQ8N6T0 577 aa20.07■□□□□ 0.8
LMNA-204ENST00000368298 TAF4BQ92750 862 aa20.07■□□□□ 0.8
LMNA-204ENST00000368298 UBE2ZQ9H832 354 aaPredicted RBP20.07■□□□□ 0.8
LMNA-204ENST00000368298 CLDND1Q9NY35 253 aa20.07■□□□□ 0.8
LMNA-204ENST00000368298 CLEC1BQ9P126 229 aa20.07■□□□□ 0.8
LMNA-204ENST00000368298 TIMM13Q9Y5L4 95 aaPredicted RBP20.07■□□□□ 0.8
LMNA-204ENST00000368298 UNC80Q8N2C7 3258 aa20.07■□□□□ 0.8
LMNA-204ENST00000368298 PMM2O15305 246 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 GCLMP48507 274 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 STX1AQ16623 288 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 CCDC40Q4G0X9 1142 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 CTXN3Q4LDR2 81 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 KRT39Q6A163 491 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 OVOS1Q6IE37 1185 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 IRF2BP1Q8IU81 584 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 TRIM59Q8IWR1 403 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 TMEM86AQ8N2M4 240 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 HDAC7Q8WUI4 952 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 CASP10Q92851 521 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 FBXL5Q9UKA1 691 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 COQ4Q9Y3A0 265 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 SNX9Q9Y5X1 595 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 BRWD1Q9NSI6 2320 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 MTCL1Q9Y4B5 1905 aaKnown RBP20.06■□□□□ 0.8
LMNA-204ENST00000368298 PLXNA3P51805 1871 aa20.06■□□□□ 0.8
LMNA-204ENST00000368298 ADAM12O43184 909 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 HUS1O60921 280 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 SRGAP2BP0DMP2 458 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 OR1D2P34982 312 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 RBM10P98175 930 aaKnown RBP20.05■□□□□ 0.8
LMNA-204ENST00000368298 SOWAHAQ2M3V2 549 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 WSCD1Q658N2 575 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 METTL23Q86XA0 190 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.05■□□□□ 0.8
LMNA-204ENST00000368298 ENOX1Q8TC92 643 aaKnown RBP20.05■□□□□ 0.8
LMNA-204ENST00000368298 MSLNLQ96KJ4 702 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 THAP9Q9H5L6 903 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 DPP7Q9UHL4 492 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 L1RE1Q9UN81 338 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 CDY1Q9Y6F8 540 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 OR6C75A6NL08 312 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 GABRDO14764 452 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 TGM5O43548 720 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 TBX10O75333 385 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 ABLIM3O94929 683 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 PAPLNO95428 1278 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 GLUD1P00367 558 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 ASS1P00966 412 aaKnown RBP20.05■□□□□ 0.8
LMNA-204ENST00000368298 HLA-DRAP01903 254 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 EPCAMP16422 314 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 HOXB8P17481 243 aaPredicted RBP20.05■□□□□ 0.8
LMNA-204ENST00000368298 DLX2Q07687 328 aaPredicted RBP20.05■□□□□ 0.8
LMNA-204ENST00000368298 WDR72Q3MJ13 1102 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 ANO6Q4KMQ2 910 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 PDCL2Q8N4E4 241 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 ZNF461Q8TAF7 563 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 PLEKHA4Q9H4M7 779 aa20.05■□□□□ 0.8
LMNA-204ENST00000368298 MXI1P50539 228 aa20.04■□□□□ 0.8
LMNA-204ENST00000368298 DCAF17Q5H9S7 520 aaPredicted RBP20.04■□□□□ 0.8
LMNA-204ENST00000368298 TCERG1LQ5VWI1 586 aa20.04■□□□□ 0.8
LMNA-204ENST00000368298 TPGS2Q68CL5 300 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms