RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ZNF268Q14587 947 aaPredicted RBP12.28□□□□□ -0.44
USF1-201ENST00000368019 DRAP1Q14919 205 aaPredicted RBP12.28□□□□□ -0.44
USF1-201ENST00000368019 ZNF568Q3ZCX4 644 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 DCAF17Q5H9S7 520 aaPredicted RBP12.28□□□□□ -0.44
USF1-201ENST00000368019 DCAF12L1Q5VU92 463 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 SYDE1Q6ZW31 735 aaPredicted RBP12.28□□□□□ -0.44
USF1-201ENST00000368019 FBXO11Q86XK2 927 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 FAM186BQ8IYM0 893 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 GPATCH11Q8N954 259 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 TRIM51Q9BSJ1 452 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 TSPYL2Q9H2G4 693 aaPredicted RBP12.28□□□□□ -0.44
USF1-201ENST00000368019 DPH5Q9H2P9 285 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 ADAM7Q9H2U9 754 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 CERS4Q9HA82 394 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 PXMP2Q9NR77 195 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 INTS9Q9NV88 658 aaKnown RBP12.28□□□□□ -0.44
USF1-201ENST00000368019 APEX2Q9UBZ4 518 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 GTF2IRD1Q9UHL9 959 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 DNAJC12Q9UKB3 198 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 NOD1Q9Y239 953 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 MRPL11Q9Y3B7 192 aaKnown RBP12.28□□□□□ -0.44
USF1-201ENST00000368019 MICAL3Q7RTP6 2002 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 ZMYM2Q9UBW7 1377 aa12.28□□□□□ -0.44
USF1-201ENST00000368019 SIP14410 1827 aa12.27□□□□□ -0.44
USF1-201ENST00000368019 NPHP3-ACAD11A0A0J9YXS1 232 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 SPDYE3A6NKU9 549 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 TGFB1I1O43294 461 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 LPXNO60711 386 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 TCEA3O75764 348 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 WFS1O76024 890 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 RGS20O76081 388 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 ATP6V1G2O95670 118 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 NR3C2P08235 984 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 MAPTP10636 758 aaKnown RBP12.27□□□□□ -0.45
USF1-201ENST00000368019 GZMAP12544 262 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 SELPP16109 830 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 COL9A1P20849 921 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 MAN1A1P33908 653 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 SKIV2L2P42285 1042 aaKnown RBP12.27□□□□□ -0.45
USF1-201ENST00000368019 WDR5P61964 334 aaKnown RBP12.27□□□□□ -0.45
USF1-201ENST00000368019 CAV1Q03135 178 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 TFF2Q03403 129 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 ENOX2Q16206 610 aaKnown RBP12.27□□□□□ -0.45
USF1-201ENST00000368019 DGKDQ16760 1214 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 SPRED3Q2MJR0 410 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 TCTN1Q2MV58 587 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 TRIM71Q2Q1W2 868 aaKnown RBP12.27□□□□□ -0.45
USF1-201ENST00000368019 SEL1L2Q5TEA6 688 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 TCERG1LQ5VWI1 586 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 TRAF7Q6Q0C0 670 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 POTEGQ6S5H5 508 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 CEP128Q6ZU80 1094 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 TRPM8Q7Z2W7 1104 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 SPRED2Q7Z698 418 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 C12orf56Q8IXR9 622 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 MAIP1Q8WWC4 291 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 ART4Q93070 314 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 LENG9Q96B70 501 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 RNF25Q96BH1 459 aaPredicted RBP12.27□□□□□ -0.45
USF1-201ENST00000368019 SERPINB12Q96P63 405 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 CELF4Q9BZC1 486 aaKnown RBP12.27□□□□□ -0.45
USF1-201ENST00000368019 NOD2Q9HC29 1040 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 WHRNQ9P202 907 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 AJAP1Q9UKB5 411 aaPredicted RBP12.27□□□□□ -0.45
USF1-201ENST00000368019 MTUS1Q9ULD2 1270 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 PCDHA3Q9Y5H8 950 aa12.27□□□□□ -0.45
USF1-201ENST00000368019 DOCK5Q9H7D0 1870 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 PIK3CDO00329 1044 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 MEIS2O14770 477 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 NBNO60934 754 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 FAM13AO94988 1023 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 GCNT3O95395 438 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 PARNO95453 639 aaKnown RBP12.26□□□□□ -0.45
USF1-201ENST00000368019 F2P00734 622 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 CKBP12277 381 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 EIF2AK2P19525 551 aaKnown RBP12.26□□□□□ -0.45
USF1-201ENST00000368019 PSEN2P49810 448 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 SNRPFP62306 86 aaKnown RBP12.26□□□□□ -0.45
USF1-201ENST00000368019 LAMC2Q13753 1193 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 GALNTL6Q49A17 601 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 ARHGEF16Q5VV41 709 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 LRRC8DQ7L1W4 858 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 HS2ST1Q7LGA3 356 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 GPIHBP1Q8IV16 184 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 CFAP61Q8NHU2 1237 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 PPTC7Q8NI37 304 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 ARNTL2Q8WYA1 636 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 MIEF2Q96C03 454 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 GRAMD1AQ96CP6 724 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 RSRC1Q96IZ7 334 aaKnown RBP12.26□□□□□ -0.45
USF1-201ENST00000368019 IFT74Q96LB3 600 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 NECAB3Q96P71 396 aaPredicted RBP12.26□□□□□ -0.45
USF1-201ENST00000368019 ZSWIM1Q9BR11 485 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 PDCD2LQ9BRP1 358 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 AMNQ9BXJ7 453 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 GPR88Q9GZN0 384 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 GOLPH3Q9H4A6 298 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 ZHX3Q9H4I2 956 aa12.26□□□□□ -0.45
USF1-201ENST00000368019 MAP3K20Q9NYL2 800 aaKnown RBP12.26□□□□□ -0.45
USF1-201ENST00000368019 VAV3Q9UKW4 847 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms