RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 RDH13Q8NBN7 331 aa25.81■■□□□ 1.72
PFDN2-201ENST00000368010 LRFN3Q9BTN0 628 aa25.81■■□□□ 1.72
PFDN2-201ENST00000368010 INTS13Q9NVM9 706 aa25.81■■□□□ 1.72
PFDN2-201ENST00000368010 LIMD1Q9UGP4 676 aa25.81■■□□□ 1.72
PFDN2-201ENST00000368010 CIZ1Q9ULV3 898 aaPredicted RBP25.81■■□□□ 1.72
PFDN2-201ENST00000368010 KRT19P08727 400 aa25.8■■□□□ 1.72
PFDN2-201ENST00000368010 FSHRP23945 695 aa25.8■■□□□ 1.72
PFDN2-201ENST00000368010 ADCY1Q08828 1119 aa25.8■■□□□ 1.72
PFDN2-201ENST00000368010 MYBPC2Q14324 1141 aa25.8■■□□□ 1.72
PFDN2-201ENST00000368010 LMBRD2Q68DH5 695 aaPredicted RBP25.8■■□□□ 1.72
PFDN2-201ENST00000368010 WDR49Q8IV35 697 aa25.8■■□□□ 1.72
PFDN2-201ENST00000368010 CSGALNACT2Q8N6G5 542 aa25.8■■□□□ 1.72
PFDN2-201ENST00000368010 LRRC52Q8N7C0 313 aa25.8■■□□□ 1.72
PFDN2-201ENST00000368010 BORCS6Q96GS4 357 aa25.8■■□□□ 1.72
PFDN2-201ENST00000368010 FAM84AQ96KN4 292 aa25.8■■□□□ 1.72
PFDN2-201ENST00000368010 SORCS3Q9UPU3 1222 aa25.8■■□□□ 1.72
PFDN2-201ENST00000368010 R3HCC1Q9Y3T6 440 aaKnown RBP25.8■■□□□ 1.72
PFDN2-201ENST00000368010 PRR33A8MZF0 331 aa25.79■■□□□ 1.72
PFDN2-201ENST00000368010 EXOC3O60645 756 aa25.79■■□□□ 1.72
PFDN2-201ENST00000368010 N4BP1O75113 896 aaKnown RBP25.79■■□□□ 1.72
PFDN2-201ENST00000368010 RHOBTB3O94955 611 aa25.79■■□□□ 1.72
PFDN2-201ENST00000368010 SEC24AO95486 1093 aa25.79■■□□□ 1.72
PFDN2-201ENST00000368010 TNNC2P02585 160 aa25.79■■□□□ 1.72
PFDN2-201ENST00000368010 RBP5P82980 135 aa25.79■■□□□ 1.72
PFDN2-201ENST00000368010 MTMR3Q13615 1198 aa25.79■■□□□ 1.72
PFDN2-201ENST00000368010 DUOXA2Q1HG44 320 aa25.79■■□□□ 1.72
PFDN2-201ENST00000368010 RNF19BQ6ZMZ0 732 aa25.79■■□□□ 1.72
PFDN2-201ENST00000368010 MYADMQ96S97 322 aa25.79■■□□□ 1.72
PFDN2-201ENST00000368010 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.79■■□□□ 1.72
PFDN2-201ENST00000368010 INSL5Q9Y5Q6 135 aa25.79■■□□□ 1.72
PFDN2-201ENST00000368010 PTPRJQ12913 1337 aa25.79■■□□□ 1.72
PFDN2-201ENST00000368010 KIF20AO95235 890 aa25.78■■□□□ 1.72
PFDN2-201ENST00000368010 ASGR2P07307 311 aa25.78■■□□□ 1.72
PFDN2-201ENST00000368010 OR4Q2P0C623 313 aa25.78■■□□□ 1.72
PFDN2-201ENST00000368010 NTHL1P78549 312 aa25.78■■□□□ 1.72
PFDN2-201ENST00000368010 GPR17Q13304 367 aa25.78■■□□□ 1.72
PFDN2-201ENST00000368010 PSMD6Q15008 389 aa25.78■■□□□ 1.72
PFDN2-201ENST00000368010 FMR1NBQ8N0W7 255 aaPredicted RBP25.78■■□□□ 1.72
PFDN2-201ENST00000368010 THEM5Q8N1Q8 247 aa25.78■■□□□ 1.72
PFDN2-201ENST00000368010 OR5B17Q8NGF7 314 aa25.78■■□□□ 1.72
PFDN2-201ENST00000368010 CXorf38Q8TB03 319 aa25.78■■□□□ 1.72
PFDN2-201ENST00000368010 FNBP1Q96RU3 617 aa25.78■■□□□ 1.72
PFDN2-201ENST00000368010 EPS15L1Q9UBC2 864 aa25.78■■□□□ 1.72
PFDN2-201ENST00000368010 PRPF40AO75400 957 aaKnown RBP25.77■■□□□ 1.72
PFDN2-201ENST00000368010 DLATP10515 647 aaKnown RBP25.77■■□□□ 1.72
PFDN2-201ENST00000368010 CYP24A1Q07973 514 aa25.77■■□□□ 1.72
PFDN2-201ENST00000368010 BFSP1Q12934 665 aa25.77■■□□□ 1.72
PFDN2-201ENST00000368010 KCNB1Q14721 858 aa25.77■■□□□ 1.72
PFDN2-201ENST00000368010 WSCD1Q658N2 575 aa25.77■■□□□ 1.72
PFDN2-201ENST00000368010 TRIM67Q6ZTA4 783 aa25.77■■□□□ 1.72
PFDN2-201ENST00000368010 CCDC127Q96BQ5 260 aa25.77■■□□□ 1.72
PFDN2-201ENST00000368010 PGLYRP2Q96PD5 576 aa25.77■■□□□ 1.72
PFDN2-201ENST00000368010 KCTD10Q9H3F6 313 aa25.77■■□□□ 1.72
PFDN2-201ENST00000368010 HCFC1R1Q9NWW0 138 aa25.77■■□□□ 1.72
PFDN2-201ENST00000368010 DNMT3BQ9UBC3 853 aaKnown RBP25.77■■□□□ 1.72
PFDN2-201ENST00000368010 SIX4Q9UIU6 781 aa25.77■■□□□ 1.72
PFDN2-201ENST00000368010 TSC2P49815 1807 aa25.77■■□□□ 1.72
PFDN2-201ENST00000368010 SCN1AP35498 2009 aa25.76■■□□□ 1.72
PFDN2-201ENST00000368010 PDXKO00764 312 aa25.76■■□□□ 1.71
PFDN2-201ENST00000368010 TNNI1P19237 187 aa25.76■■□□□ 1.71
PFDN2-201ENST00000368010 FAM160A1Q05DH4 1040 aa25.76■■□□□ 1.71
PFDN2-201ENST00000368010 PABPC1LQ4VXU2 614 aaKnown RBP25.76■■□□□ 1.71
PFDN2-201ENST00000368010 UBALD2Q8IYN6 164 aa25.76■■□□□ 1.71
PFDN2-201ENST00000368010 OR10T2Q8NGX3 314 aa25.76■■□□□ 1.71
PFDN2-201ENST00000368010 CGRRF1Q99675 332 aa25.76■■□□□ 1.71
PFDN2-201ENST00000368010 IGSF9Q9P2J2 1179 aa25.76■■□□□ 1.71
PFDN2-201ENST00000368010 HUS1O60921 280 aa25.75■■□□□ 1.71
PFDN2-201ENST00000368010 SIGLEC14Q08ET2 396 aa25.75■■□□□ 1.71
PFDN2-201ENST00000368010 MYO1EQ12965 1108 aa25.75■■□□□ 1.71
PFDN2-201ENST00000368010 SLC9A9Q8IVB4 645 aa25.75■■□□□ 1.71
PFDN2-201ENST00000368010 ELMOD1Q8N336 334 aa25.75■■□□□ 1.71
PFDN2-201ENST00000368010 TMEM209Q96SK2 561 aa25.75■■□□□ 1.71
PFDN2-201ENST00000368010 KCNK12Q9HB15 430 aa25.75■■□□□ 1.71
PFDN2-201ENST00000368010 ZFP37Q9Y6Q3 630 aaPredicted RBP25.75■■□□□ 1.71
PFDN2-201ENST00000368010 RHOP08100 348 aa25.74■■□□□ 1.71
PFDN2-201ENST00000368010 LAMP2P13473 410 aa25.74■■□□□ 1.71
PFDN2-201ENST00000368010 PTPN2P17706 415 aa25.74■■□□□ 1.71
PFDN2-201ENST00000368010 TWF1Q12792 350 aa25.74■■□□□ 1.71
PFDN2-201ENST00000368010 SNW1Q13573 536 aaKnown RBP25.74■■□□□ 1.71
PFDN2-201ENST00000368010 SCARA3Q6AZY7 606 aa25.74■■□□□ 1.71
PFDN2-201ENST00000368010 TRAPPC11Q7Z392 1133 aa25.74■■□□□ 1.71
PFDN2-201ENST00000368010 ENGASEQ8NFI3 743 aa25.74■■□□□ 1.71
PFDN2-201ENST00000368010 TMEM174Q8WUU8 243 aa25.74■■□□□ 1.71
PFDN2-201ENST00000368010 MFSD14AQ96MC6 490 aa25.74■■□□□ 1.71
PFDN2-201ENST00000368010 RTP3Q9BQQ7 232 aa25.74■■□□□ 1.71
PFDN2-201ENST00000368010 ZCWPW1Q9H0M4 648 aa25.74■■□□□ 1.71
PFDN2-201ENST00000368010 GDAP2Q9NXN4 497 aa25.74■■□□□ 1.71
PFDN2-201ENST00000368010 CDH7Q9ULB5 785 aa25.74■■□□□ 1.71
PFDN2-201ENST00000368010 MRPS23Q9Y3D9 190 aaKnown RBP25.74■■□□□ 1.71
PFDN2-201ENST00000368010 YIPF1Q9Y548 306 aa25.74■■□□□ 1.71
PFDN2-201ENST00000368010 SNX9Q9Y5X1 595 aa25.74■■□□□ 1.71
PFDN2-201ENST00000368010 MTMR11A4FU01 709 aa25.73■■□□□ 1.71
PFDN2-201ENST00000368010 TMEM221A6NGB7 291 aa25.73■■□□□ 1.71
PFDN2-201ENST00000368010 M0R296 226 aa25.73■■□□□ 1.71
PFDN2-201ENST00000368010 CALUO43852 315 aaPredicted RBP25.73■■□□□ 1.71
PFDN2-201ENST00000368010 VNN2O95498 520 aa25.73■■□□□ 1.71
PFDN2-201ENST00000368010 NR3C1P04150 777 aa25.73■■□□□ 1.71
PFDN2-201ENST00000368010 DUSP4Q13115 394 aa25.73■■□□□ 1.71
PFDN2-201ENST00000368010 PLD1Q13393 1074 aa25.73■■□□□ 1.71
PFDN2-201ENST00000368010 IQCEQ6IPM2 695 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms