RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 EDRF1Q3B7T1 1238 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 XPO1O14980 1071 aaKnown RBP12.97□□□□□ -0.33
TPR-201ENST00000367478 EPS8Q12929 822 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 CTTNQ14247 550 aaKnown RBP12.97□□□□□ -0.33
TPR-201ENST00000367478 ILKAPQ9H0C8 392 aaPredicted RBP12.97□□□□□ -0.33
TPR-201ENST00000367478 BCS1LQ9Y276 419 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 THNSL1Q8IYQ7 743 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 EXD1Q8NHP7 514 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 CENPTQ96BT3 561 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 OSBPL6Q9BZF3 934 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 MANSC1Q9H8J5 431 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 AVENQ9NQS1 362 aaPredicted RBP12.97□□□□□ -0.33
TPR-201ENST00000367478 TBX22Q9Y458 520 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 FHOD1Q9Y613 1164 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 ADGRG1Q9Y653 693 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 FAM47E-STBD1D6RA91 191 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 AKAP5P24588 427 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 PTPN12Q05209 780 aaKnown RBP12.97□□□□□ -0.33
TPR-201ENST00000367478 ITIH4Q14624 930 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 KIZQ2M2Z5 673 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 AGAP9Q5VTM2 703 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 PTRHD1Q6GMV3 140 aaKnown RBP12.97□□□□□ -0.33
TPR-201ENST00000367478 OR8H2Q8N162 312 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 RNFT2Q96EX2 444 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 CATSPER2Q96P56 530 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 FRMD8P1Q9BZ68 369 aaPredicted RBP12.97□□□□□ -0.33
TPR-201ENST00000367478 GOLPH3Q9H4A6 298 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 MYO3BQ8WXR4 1341 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 WARSP23381 471 aaKnown RBP12.97□□□□□ -0.33
TPR-201ENST00000367478 NFX1Q12986 1120 aaKnown RBP12.97□□□□□ -0.33
TPR-201ENST00000367478 STKLD1Q8NE28 680 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 ATXN7L3BQ96GX2 97 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 CLMNQ96JQ2 1002 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 STK33Q9BYT3 514 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 FAM49AQ9H0Q0 323 aaPredicted RBP12.97□□□□□ -0.33
TPR-201ENST00000367478 IARS2Q9NSE4 1012 aaKnown RBP12.97□□□□□ -0.33
TPR-201ENST00000367478 B2RBV5 119 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 ATP1A3P13637 1013 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 PTK7Q13308 1070 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 PPP1R36Q96LQ0 422 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 CAMKK2Q96RR4 588 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 CEP44Q9C0F1 390 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 TRPC7Q9HCX4 862 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 ZNF302Q9NR11 478 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 POU4F1Q01851 419 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 INAQ16352 499 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 ADCK2Q7Z695 626 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 ZNF786Q8N393 782 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 PIK3R5Q8WYR1 880 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 DCLRE1BQ9H816 532 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 RAB6BQ9NRW1 208 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 SOAT1P35610 550 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 TGFBR2P37173 567 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 SFSWAPQ12872 951 aaKnown RBP12.97□□□□□ -0.33
TPR-201ENST00000367478 KCNB1Q14721 858 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 APBB2Q92870 758 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 CAAP1Q9H8G2 361 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 EFCAB1Q9HAE3 211 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 SPASTQ9UBP0 616 aa12.97□□□□□ -0.33
TPR-201ENST00000367478 BAZ2BQ9UIF8 2168 aaKnown RBP12.96□□□□□ -0.33
TPR-201ENST00000367478 MYO5CQ9NQX4 1742 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 AP1S2P56377 157 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 PDCD10Q9BUL8 212 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 KIFC1Q9BW19 673 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 PACSIN1Q9BY11 444 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 DOLKQ9UPQ8 538 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 GDAQ9Y2T3 454 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 PIPSLA2A3N6 862 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 ACADSBP45954 432 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 PIGOQ8TEQ8 1089 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 VAV3Q9UKW4 847 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 AMACRQ9UHK6 382 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 BMP10O95393 424 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 RAD23AP54725 363 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 OOSP2Q86WS3 158 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 CROCCP3Q8IVE0 287 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 ZFRQ96KR1 1074 aaKnown RBP12.96□□□□□ -0.33
TPR-201ENST00000367478 SIK2Q9H0K1 926 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 USP17L3A6NCW0 530 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 USP17L4A6NCW7 530 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 PFKFB3Q16875 520 aaPredicted RBP12.96□□□□□ -0.33
TPR-201ENST00000367478 ARMC6Q6NXE6 501 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 C3orf62Q6ZUJ4 267 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 USP17L1Q7RTZ2 530 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 NSUN6Q8TEA1 469 aaKnown RBP12.96□□□□□ -0.33
TPR-201ENST00000367478 RHBDL2Q9NX52 303 aa12.96□□□□□ -0.33
TPR-201ENST00000367478 HERC5Q9UII4 1024 aaKnown RBP12.96□□□□□ -0.33
TPR-201ENST00000367478 ABCB11O95342 1321 aa12.96□□□□□ -0.34
TPR-201ENST00000367478 PMF1Q6P1K2 205 aa12.96□□□□□ -0.34
TPR-201ENST00000367478 KLHL24Q6TFL4 600 aa12.96□□□□□ -0.34
TPR-201ENST00000367478 ARHGAP27Q6ZUM4 889 aa12.96□□□□□ -0.34
TPR-201ENST00000367478 IFNEQ86WN2 208 aa12.96□□□□□ -0.34
TPR-201ENST00000367478 SVOPQ8N4V2 548 aa12.96□□□□□ -0.34
TPR-201ENST00000367478 KLHL4Q9C0H6 718 aa12.96□□□□□ -0.34
TPR-201ENST00000367478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.347e-8■■■■□ 20.8
TPR-201ENST00000367478 KCND2Q9NZV8 630 aa12.96□□□□□ -0.34
TPR-201ENST00000367478 ANKRD65E5RJM6 399 aa12.96□□□□□ -0.34
TPR-201ENST00000367478 SLC16A2P36021 539 aa12.96□□□□□ -0.34
TPR-201ENST00000367478 SLC18A3Q16572 532 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms