RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 PIGRP01833 764 aa12.12□□□□□ -0.47
H3F3A-203ENST00000366815 C8AP07357 584 aa12.12□□□□□ -0.47
H3F3A-203ENST00000366815 HNRNPA1P09651 372 aaKnown RBP eCLIP12.12□□□□□ -0.47
H3F3A-203ENST00000366815 SYT1P21579 422 aa12.12□□□□□ -0.47
H3F3A-203ENST00000366815 GBP2P32456 591 aaPredicted RBP12.12□□□□□ -0.47
H3F3A-203ENST00000366815 RPL9P32969 192 aaKnown RBP12.12□□□□□ -0.47
H3F3A-203ENST00000366815 OR1D2P34982 312 aa12.12□□□□□ -0.47
H3F3A-203ENST00000366815 TCF15Q12870 199 aa12.12□□□□□ -0.47
H3F3A-203ENST00000366815 DHX8Q14562 1220 aaKnown RBP12.12□□□□□ -0.47
H3F3A-203ENST00000366815 ANKS3Q6ZW76 656 aa12.12□□□□□ -0.47
H3F3A-203ENST00000366815 USP49Q70CQ1 688 aa12.12□□□□□ -0.47
H3F3A-203ENST00000366815 ALYREFQ86V81 257 aaKnown RBP12.12□□□□□ -0.47
H3F3A-203ENST00000366815 INTS4Q96HW7 963 aaKnown RBP12.12□□□□□ -0.47
H3F3A-203ENST00000366815 FIZ1Q96SL8 496 aa12.12□□□□□ -0.47
H3F3A-203ENST00000366815 PRRX2Q99811 253 aa12.12□□□□□ -0.47
H3F3A-203ENST00000366815 ALG2Q9H553 416 aa12.12□□□□□ -0.47
H3F3A-203ENST00000366815 FBXO2Q9UK22 296 aaPredicted RBP12.12□□□□□ -0.47
H3F3A-203ENST00000366815 DUSP12Q9UNI6 340 aa12.12□□□□□ -0.47
H3F3A-203ENST00000366815 CDY1Q9Y6F8 540 aa12.12□□□□□ -0.47
H3F3A-203ENST00000366815 TTC26A0AVF1 554 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 TBC1D4O60343 1298 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 FAM13AO94988 1023 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 POU2F2P09086 479 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 CXCL8P10145 99 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 BMP2P12643 396 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 SCP2P22307 547 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 PPM1LQ5SGD2 360 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 AXDND1Q5T1B0 1012 aaPredicted RBP12.11□□□□□ -0.47
H3F3A-203ENST00000366815 LIN9Q5TKA1 542 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 SLC8B1Q6J4K2 584 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 FAM173BQ6P4H8 233 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 GRASPQ7Z6J2 395 aaPredicted RBP12.11□□□□□ -0.47
H3F3A-203ENST00000366815 SLC7A14Q8TBB6 771 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 RSAD2Q8WXG1 361 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 LARP4BQ92615 738 aaKnown RBP12.11□□□□□ -0.47
H3F3A-203ENST00000366815 EPSTI1Q96J88 318 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 PLEKHA5Q9HAU0 1116 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 PARVGQ9HBI0 331 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.11□□□□□ -0.47
H3F3A-203ENST00000366815 TUBGCP4Q9UGJ1 667 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 TBX20Q9UMR3 447 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 CACNA1HO95180 2353 aa12.11□□□□□ -0.47
H3F3A-203ENST00000366815 ANHXE9PGG2 379 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 K7ENM7 598 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 SYN3O14994 580 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 CCL16O15467 120 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 NARSO43776 548 aaKnown RBP12.1□□□□□ -0.47
H3F3A-203ENST00000366815 ADRB2P07550 413 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 CLTAP09496 248 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 LAMP2P13473 410 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 MARCKSP29966 332 aaPredicted RBP12.1□□□□□ -0.47
H3F3A-203ENST00000366815 TNFSF9P41273 254 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 RAB15P59190 212 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 NTHL1P78549 312 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 GTF2BQ00403 316 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 ROR1Q01973 937 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 HTR4Q13639 388 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 MRPL58Q14197 206 aaKnown RBP12.1□□□□□ -0.47
H3F3A-203ENST00000366815 ZBTB6Q15916 424 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 UVSSAQ2YD98 709 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 SPECC1Q5M775 1068 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 ZBTB41Q5SVQ8 909 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 CWF19L1Q69YN2 538 aaKnown RBP12.1□□□□□ -0.47
H3F3A-203ENST00000366815 SLC39A4Q6P5W5 647 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 RTL10Q7L3V2 364 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 GET4Q7L5D6 327 aaPredicted RBP12.1□□□□□ -0.47
H3F3A-203ENST00000366815 TMEM130Q8N3G9 435 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 MYCT1Q8N699 235 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 TMEM105Q8N8V8 129 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 RASSF8Q8NHQ8 419 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 NXPE3Q969Y0 559 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 BICD1Q96G01 975 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 SUSD3Q96L08 255 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 MTMR6Q9Y217 621 aa12.1□□□□□ -0.47
H3F3A-203ENST00000366815 SRPRBQ9Y5M8 271 aaKnown RBP12.1□□□□□ -0.47
H3F3A-203ENST00000366815 MORC2Q9Y6X9 1032 aaPredicted RBP12.1□□□□□ -0.47
H3F3A-203ENST00000366815 A0A0B4J269 797 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 WDR27A2RRH5 827 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 K7ELQ4 463 aaPredicted RBP12.09□□□□□ -0.47
H3F3A-203ENST00000366815 HNRNPDLO14979 420 aaKnown RBP12.09□□□□□ -0.47
H3F3A-203ENST00000366815 OGTO15294 1046 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 ABLIM3O94929 683 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 NPR3P17342 541 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 NMT1P30419 496 aaKnown RBP12.09□□□□□ -0.47
H3F3A-203ENST00000366815 LRPAP1P30533 357 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 DDIT3P35638 169 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 MATR3P43243 847 aaKnown RBP eCLIP12.09□□□□□ -0.47
H3F3A-203ENST00000366815 LIG4P49917 911 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 SPAG1Q07617 926 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 ENOX2Q16206 610 aaKnown RBP12.09□□□□□ -0.47
H3F3A-203ENST00000366815 MAP4K3Q8IVH8 894 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 SLC44A3Q8N4M1 653 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 ZNF461Q8TAF7 563 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 GLMNQ92990 594 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 ST6GALNAC4Q9H4F1 302 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 HCFC1R1Q9NWW0 138 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 PGPEP1Q9NXJ5 209 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 NUB1Q9Y5A7 615 aa12.09□□□□□ -0.47
H3F3A-203ENST00000366815 ZFP37Q9Y6Q3 630 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms