RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 POMCP01189 267 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 LCP1P13796 627 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 NFIL3Q16649 462 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 ATP13A4Q4VNC1 1196 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 MORF4L1Q9UBU8 362 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 PHIPQ8WWQ0 1821 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 CASTOR2A6NHX0 329 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 I3L4J1 428 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 RNF8O76064 485 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 GLI1P08151 1106 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 RNASELQ05823 741 aaKnown RBP12.35□□□□□ -0.43
HPS1-204ENST00000361490 CALCOCO2Q13137 446 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 PPP6R3Q5H9R7 873 aaPredicted RBP12.35□□□□□ -0.43
HPS1-204ENST00000361490 CCDC33Q8N5R6 958 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 APBA2Q99767 749 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 LPIN3Q9BQK8 851 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 GPR88Q9GZN0 384 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 PDZD7Q9H5P4 517 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 ZNF446Q9NWS9 450 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 RASAL2Q9UJF2 1139 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 TTC7AQ9ULT0 858 aaPredicted RBP12.35□□□□□ -0.43
HPS1-204ENST00000361490 TNFSF13BQ9Y275 285 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 DAAM1Q9Y4D1 1078 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 GREB1LQ9C091 1923 aaPredicted RBP12.34□□□□□ -0.43
HPS1-204ENST00000361490 ZBTB42B2RXF5 422 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 LGR5O75473 907 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 ZRANB2O95218 330 aaKnown RBP eCLIP12.34□□□□□ -0.43
HPS1-204ENST00000361490 KRT10P13645 584 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 DESP17661 470 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 CHRNB2P17787 502 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 NDST1P52848 882 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 RPL7AP62424 266 aaKnown RBP12.34□□□□□ -0.43
HPS1-204ENST00000361490 SP3Q02447 781 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 PAK2Q13177 524 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 NT5DC3Q86UY8 548 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 C1orf127Q8N9H9 656 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 USP38Q8NB14 1042 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 CD99L2Q8TCZ2 262 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 CAPNS2Q96L46 248 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 MAK16Q9BXY0 300 aaKnown RBP12.34□□□□□ -0.43
HPS1-204ENST00000361490 RNF39Q9H2S5 420 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 CPSF3Q9UKF6 684 aaKnown RBP12.34□□□□□ -0.43
HPS1-204ENST00000361490 MRPL42Q9Y6G3 142 aaKnown RBP12.34□□□□□ -0.43
HPS1-204ENST00000361490 NRCAMQ92823 1304 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 HUS1O60921 280 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 MYBL2P10244 700 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 KRT3P12035 628 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 DR1Q01658 176 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 SLC10A6Q3KNW5 377 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 TUBGCP4Q9UGJ1 667 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 ZC3H4Q9UPT8 1303 aaKnown RBP12.34□□□□□ -0.43
HPS1-204ENST00000361490 TSPAN1O60635 241 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 ADCY8P40145 1251 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 CLEC16AQ2KHT3 1053 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 MCOLN2Q8IZK6 566 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 ABRAQ8N0Z2 381 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 ALG3Q92685 438 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 FBXL18Q96ME1 805 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 GAD1Q99259 594 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 FBXL5Q9UKA1 691 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 GTF3C4Q9UKN8 822 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 PCDHGC5Q9Y5F6 944 aa12.34□□□□□ -0.43
HPS1-204ENST00000361490 ARFGEF1Q9Y6D6 1849 aa12.33□□□□□ -0.43
HPS1-204ENST00000361490 F5H423 210 aaPredicted RBP12.33□□□□□ -0.44
HPS1-204ENST00000361490 PYGMP11217 842 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 NUMBP49757 651 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 TUBB4BP68371 445 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 SLC27A1Q6PCB7 646 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 SOCS4Q8WXH5 440 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 C18orf8Q96DM3 657 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 KATNAL1Q9BW62 490 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 FZD8Q9H461 694 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 HMGXB4Q9UGU5 601 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 NR2E1Q9Y466 385 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 MED7O43513 233 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 HCRTO43612 131 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 IL18RAPO95256 599 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 ASS1P00966 412 aaKnown RBP12.33□□□□□ -0.44
HPS1-204ENST00000361490 H2AFXP16104 143 aaPredicted RBP12.33□□□□□ -0.44
HPS1-204ENST00000361490 SLC8A3P57103 927 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 MCL1Q07820 350 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 DENND1BQ6P3S1 775 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 TSHZ1Q6ZSZ6 1077 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 FAM81BQ96LP2 452 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 DOCK3Q8IZD9 2030 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 PPEF2O14830 753 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 ATP1A2P50993 1020 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 AP3M2P53677 418 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 INHBEP58166 350 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 FAM117BQ6P1L5 589 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 CEP57Q86XR8 500 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 RNF34Q969K3 372 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 TJP2Q9UDY2 1190 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 FAN1Q9Y2M0 1017 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 CDY2AQ9Y6F7 541 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 RGPD3A6NKT7 1758 aaPredicted RBP12.33□□□□□ -0.44
HPS1-204ENST00000361490 RGPD4Q7Z3J3 1758 aa12.33□□□□□ -0.44
HPS1-204ENST00000361490 EVPLQ92817 2033 aa12.32□□□□□ -0.44
HPS1-204ENST00000361490 CAPN9O14815 690 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms