RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 SUN1O94901 812 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 GJB6O95452 261 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 UBTFL6P0CB48 400 aaPredicted RBP9.63□□□□□ -0.87
TOP1-201ENST00000361337 BRAFP15056 766 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 QARSP47897 775 aaKnown RBP9.63□□□□□ -0.87
TOP1-201ENST00000361337 PPP3CAQ08209 521 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 STRN3Q13033 797 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 TMEM63BQ5T3F8 832 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 FASTKD5Q7L8L6 764 aaKnown RBP9.63□□□□□ -0.87
TOP1-201ENST00000361337 SRRM1Q8IYB3 904 aaKnown RBP9.63□□□□□ -0.87
TOP1-201ENST00000361337 TRAPPC12Q8WVT3 735 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 CD101Q93033 1021 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 PDCD2LQ9BRP1 358 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 PARVGQ9HBI0 331 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 KMT5AQ9NQR1 393 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 DIS3Q9Y2L1 958 aaKnown RBP9.63□□□□□ -0.87
TOP1-201ENST00000361337 SLX4Q8IY92 1834 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 TRPA1O75762 1119 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 SSTR3P32745 418 aaPredicted RBP9.63□□□□□ -0.87
TOP1-201ENST00000361337 GCLMP48507 274 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 LIG4P49917 911 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 KRT17Q04695 432 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 GRIK3Q13003 919 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 KIF22Q14807 665 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 C2CD6Q53TS8 623 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 CDCA2Q69YH5 1023 aaPredicted RBP9.63□□□□□ -0.87
TOP1-201ENST00000361337 LLGL2Q6P1M3 1020 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 BTNL9Q6UXG8 535 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 NOP9Q86U38 636 aaKnown RBP9.63□□□□□ -0.87
TOP1-201ENST00000361337 ZNF483Q8TF39 744 aaPredicted RBP9.63□□□□□ -0.87
TOP1-201ENST00000361337 CKAP2Q8WWK9 683 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 SPIRE2Q8WWL2 714 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 MKL1Q969V6 931 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 MXRA8Q9BRK3 442 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.63□□□□□ -0.87
TOP1-201ENST00000361337 NKIRAS1Q9NYS0 192 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 COL20A1Q9P218 1284 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 ATP8B3O60423 1300 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 CNTNAP1P78357 1384 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 PLIN4Q96Q06 1357 aa9.63□□□□□ -0.87
TOP1-201ENST00000361337 PODXLO00592 558 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 ATP2A2P16615 1042 aaKnown RBP9.62□□□□□ -0.87
TOP1-201ENST00000361337 DSG3P32926 999 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 TUBP50607 506 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 INHBEP58166 350 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 CETN1Q12798 172 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 RCN2Q14257 317 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 MAP7D1Q3KQU3 841 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 TKFCQ3LXA3 575 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 MIS18BP1Q6P0N0 1132 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 C1orf186Q6ZWK4 172 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 TAOK1Q7L7X3 1001 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 APBB1IPQ7Z5R6 666 aaPredicted RBP9.62□□□□□ -0.87
TOP1-201ENST00000361337 TRIM74Q86UV6 250 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 TRIM73Q86UV7 250 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 SLC47A2Q86VL8 602 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 LRRC43Q8N309 656 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 UBL4BQ8N7F7 174 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 ATP6V0A1Q93050 837 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 JPH1Q9HDC5 661 aaPredicted RBP9.62□□□□□ -0.87
TOP1-201ENST00000361337 HOMER3Q9NSC5 361 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 ARL2BPQ9Y2Y0 163 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 DYTNA2CJ06 578 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 WDR64B1ANS9 1081 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 CCND1P24385 295 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 TARSP26639 723 aaKnown RBP9.62□□□□□ -0.87
TOP1-201ENST00000361337 DMP1Q13316 513 aaPredicted RBP9.62□□□□□ -0.87
TOP1-201ENST00000361337 SLMAPQ14BN4 828 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 SEL1L2Q5TEA6 688 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 RHPN2Q8IUC4 686 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 PLEKHO2Q8TD55 490 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 FAM20AQ96MK3 541 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 SMC6Q96SB8 1091 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 MOV10L1Q9BXT6 1211 aaKnown RBP9.62□□□□□ -0.87
TOP1-201ENST00000361337 PORCNQ9H237 461 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 RXFP1Q9HBX9 757 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 SLCO1B3Q9NPD5 702 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 CHMP2BQ9UQN3 213 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 EMSYQ7Z589 1322 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 PRRC2BQ5JSZ5 2229 aaKnown RBP9.62□□□□□ -0.87
TOP1-201ENST00000361337 WDR91A4D1P6 747 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 SPDYE16A6NNV3 312 aaPredicted RBP9.62□□□□□ -0.87
TOP1-201ENST00000361337 O00370 1275 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 SPOPO43791 374 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 SLITRK3O94933 977 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 EYA4O95677 639 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 LINGO3P0C6S8 592 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 ITGB5P18084 799 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 PSMD6Q15008 389 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 HP1BP3Q5SSJ5 553 aaPredicted RBP9.62□□□□□ -0.87
TOP1-201ENST00000361337 C11orf63Q6NUN7 778 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 ZNF720Q7Z2F6 126 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 PPM1KQ8N3J5 372 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 GPRC5AQ8NFJ5 357 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 CFAP61Q8NHU2 1237 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 TEPSINQ96N21 525 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 NUP85Q9BW27 656 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 MYLK2Q9H1R3 596 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 OLFML3Q9NRN5 406 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 METTL5Q9NRN9 209 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms