RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 RASA1P20936 1047 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 PNPLA4P41247 253 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 HUNKP57058 714 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 STX3Q13277 289 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 INPP5AQ14642 412 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 NOA1Q8NC60 698 aaKnown RBP12.81□□□□□ -0.36
DNMT1-202ENST00000359526 RAPGEF5Q92565 580 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 PPP1R16BQ96T49 567 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 FAM49AQ9H0Q0 323 aaPredicted RBP12.81□□□□□ -0.36
DNMT1-202ENST00000359526 NSMCE4AQ9NXX6 385 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 CARSP49589 748 aaKnown RBP12.81□□□□□ -0.36
DNMT1-202ENST00000359526 ZNF200P98182 395 aaPredicted RBP12.81□□□□□ -0.36
DNMT1-202ENST00000359526 MED21Q13503 144 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 LONRF1Q17RB8 773 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 RABGAP1LQ5R372 815 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 C1orf228Q6PIY5 440 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 C16orf89Q6UX73 402 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 TEX12Q9BXU0 123 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 PRMT7Q9NVM4 692 aaPredicted RBP12.81□□□□□ -0.36
DNMT1-202ENST00000359526 PCDHB2Q9Y5E7 798 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 CELF2O95319 508 aaKnown RBP12.81□□□□□ -0.36
DNMT1-202ENST00000359526 RPA1P27694 616 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 PTPAQ15257 358 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 IMPG1Q17R60 797 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 SGSM1Q2NKQ1 1148 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 SPDYE1Q8NFV5 336 aaPredicted RBP12.81□□□□□ -0.36
DNMT1-202ENST00000359526 HPS3Q969F9 1004 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 IDI2Q9BXS1 227 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 ERAP1Q9NZ08 941 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 PXDNQ92626 1479 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 ANP32DO95626 131 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 KRT16P08779 473 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 KCNA3P22001 575 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 NPEPPSP55786 919 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 POU5F1BQ06416 359 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 Q3C1V9 767 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 FRMD8P1Q9BZ68 369 aaPredicted RBP12.81□□□□□ -0.36
DNMT1-202ENST00000359526 CYP4F11Q9HBI6 524 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 TMEM8AQ9HCN3 771 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 EPB41L4AQ9HCS5 686 aaPredicted RBP12.81□□□□□ -0.36
DNMT1-202ENST00000359526 RGL1Q9NZL6 768 aa12.81□□□□□ -0.36
DNMT1-202ENST00000359526 A8MXQ7 604 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 ARPP19P56211 112 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 SLC20A2Q08357 652 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 NSUN2Q08J23 767 aaKnown RBP eCLIP12.8□□□□□ -0.36
DNMT1-202ENST00000359526 RFX8Q6ZV50 586 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 ANKMY2Q8IV38 441 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 FBXL16Q8N461 479 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 ULK4Q96C45 1275 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 MXRA8Q9BRK3 442 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 FUT8Q9BYC5 575 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 PAK5Q9P286 719 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 HPSEQ9Y251 543 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 TMX2Q9Y320 296 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 MAGEA4P43358 317 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 ITIH4Q14624 930 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 SNRNP35Q16560 246 aaKnown RBP12.8□□□□□ -0.36
DNMT1-202ENST00000359526 PAPD7Q5XG87 772 aaKnown RBP12.8□□□□□ -0.36
DNMT1-202ENST00000359526 ZC3H7BQ9UGR2 993 aaKnown RBP12.8□□□□□ -0.36
DNMT1-202ENST00000359526 TMEM120BA0PK00 339 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 SEC24CP53992 1094 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 PRAMEP78395 509 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 BFSP2Q13515 415 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 LAMB3Q13751 1172 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 FASTKD1Q53R41 847 aaKnown RBP12.8□□□□□ -0.36
DNMT1-202ENST00000359526 PID1Q7Z2X4 250 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 PRUNE1Q86TP1 453 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 SETD3Q86TU7 594 aaPredicted RBP12.8□□□□□ -0.36
DNMT1-202ENST00000359526 SNX19Q92543 992 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 OSBPL8Q9BZF1 889 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 CHCHD3Q9NX63 227 aaKnown RBP12.8□□□□□ -0.36
DNMT1-202ENST00000359526 STX18Q9P2W9 335 aaKnown RBP12.8□□□□□ -0.36
DNMT1-202ENST00000359526 PRR12Q9ULL5 1215 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 ALG6Q9Y672 507 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 MYPNQ86TC9 1320 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 KCNN4O15554 427 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 COMTP21964 271 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 NEK2P51955 445 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 SFSWAPQ12872 951 aaKnown RBP12.8□□□□□ -0.36
DNMT1-202ENST00000359526 TWF2Q6IBS0 349 aaKnown RBP12.8□□□□□ -0.36
DNMT1-202ENST00000359526 USP49Q70CQ1 688 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 ANKRD23Q86SG2 305 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 PPHLN1Q8NEY8 458 aaKnown RBP12.8□□□□□ -0.36
DNMT1-202ENST00000359526 OR9Q1Q8NGQ5 310 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 DTX3LQ8TDB6 740 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 DNAJC9Q8WXX5 260 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 SEZ6LQ9BYH1 1024 aa12.8□□□□□ -0.36
DNMT1-202ENST00000359526 DBR1Q9UK59 544 aaKnown RBP12.8□□□□□ -0.36
DNMT1-202ENST00000359526 FNDC3AQ9Y2H6 1198 aaKnown RBP12.8□□□□□ -0.36
DNMT1-202ENST00000359526 ADAMTSL3P82987 1691 aa12.79□□□□□ -0.36
DNMT1-202ENST00000359526 KDM1AO60341 852 aa12.79□□□□□ -0.36
DNMT1-202ENST00000359526 RALAP11233 206 aa12.79□□□□□ -0.36
DNMT1-202ENST00000359526 PPATQ06203 517 aa12.79□□□□□ -0.36
DNMT1-202ENST00000359526 PARD3BQ8TEW8 1205 aa12.79□□□□□ -0.36
DNMT1-202ENST00000359526 TSPAN17Q96FV3 270 aa12.79□□□□□ -0.36
DNMT1-202ENST00000359526 EPAS1Q99814 870 aa12.79□□□□□ -0.36
DNMT1-202ENST00000359526 FUCA2Q9BTY2 467 aa12.79□□□□□ -0.36
DNMT1-202ENST00000359526 XPO7Q9UIA9 1087 aaKnown RBP12.79□□□□□ -0.36
DNMT1-202ENST00000359526 ENO1P06733 434 aaKnown RBP12.79□□□□□ -0.36
DNMT1-202ENST00000359526 KLRC1P26715 233 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms