RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ZBTB5O15062 677 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 PSAPP07602 524 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 ZNF844Q08AG5 666 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 DNAJC10Q8IXB1 793 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 C1orf50Q9BV19 199 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 ABCC3O15438 1527 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 CYP2D7A0A087X1C5 515 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 TAF4O00268 1085 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 RGS5O15539 181 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 MTTPP55157 894 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 STX5Q13190 355 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 SYDE2Q5VT97 1194 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 BNC2Q6ZN30 1099 aaPredicted RBP9.16□□□□□ -0.94
COL6A6-201ENST00000358511 MCPH1Q8NEM0 835 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 RIN3Q8TB24 985 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 C18orf8Q96DM3 657 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 TSPAN17Q96FV3 270 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 NEUROG2Q9H2A3 272 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 HMG20AQ9NP66 347 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 TIMMDC1Q9NPL8 285 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 TRIM24O15164 1050 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 COILP38432 576 aaPredicted RBP9.16□□□□□ -0.94
COL6A6-201ENST00000358511 CEBPAP49715 358 aaPredicted RBP9.16□□□□□ -0.94
COL6A6-201ENST00000358511 PEX3P56589 373 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 TSHZ1Q6ZSZ6 1077 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 TMC3Q7Z5M5 1100 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 KCNB2Q92953 911 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 VPS33BQ9H267 617 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 TMEM191CA6NGB0 347 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 SFI1A8K8P3 1242 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 PP2D1A8MPX8 630 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 ATXN3P54252 364 aaPredicted RBP9.16□□□□□ -0.94
COL6A6-201ENST00000358511 PDIA5Q14554 519 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 RNF135Q8IUD6 432 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 CCDC60Q8IWA6 550 aaPredicted RBP9.16□□□□□ -0.94
COL6A6-201ENST00000358511 PPIL6Q8IXY8 311 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 C7orf31Q8N865 590 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 SCFD1Q8WVM8 642 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 PGBD4Q96DM1 585 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 FAM20AQ96MK3 541 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 DAPK2Q9UIK4 370 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 E5RI56 91 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 PSTPIP1O43586 416 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 LCA5LO95447 670 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 DYNLL1P63167 89 aaKnown RBP9.16□□□□□ -0.94
COL6A6-201ENST00000358511 GDPD5Q8WTR4 605 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 APBB2Q92870 758 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 ULK4Q96C45 1275 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 XDHP47989 1333 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 ATP5BP06576 529 aaKnown RBP9.16□□□□□ -0.94
COL6A6-201ENST00000358511 KLRC1P26715 233 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 PPP1R3GB7ZBB8 358 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 PLEKP08567 350 aaPredicted RBP9.16□□□□□ -0.94
COL6A6-201ENST00000358511 PTDSS1P48651 473 aaKnown RBP9.16□□□□□ -0.94
COL6A6-201ENST00000358511 SPICE1Q8N0Z3 855 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 TTC39CQ8N584 583 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 SPATA18Q8TC71 538 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 COPG2Q9UBF2 871 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 OVOS2A0A0G2JMS6 1433 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 MROH7Q68CQ1 1323 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 GLI1P08151 1106 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 SPDYCQ5MJ68 293 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 SYCP2LQ5T4T6 812 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 RINLQ6ZS11 566 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 LRRC6Q86X45 466 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 GPBP1L1Q9HC44 474 aaPredicted RBP9.16□□□□□ -0.94
COL6A6-201ENST00000358511 SAR1AQ9NR31 198 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 DKK3Q9UBP4 350 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 CCDC88AQ3V6T2 1871 aa9.16□□□□□ -0.94
COL6A6-201ENST00000358511 PRELPP51888 382 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 GRM4Q14833 912 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 ST13P5Q8NFI4 369 aaPredicted RBP9.15□□□□□ -0.94
COL6A6-201ENST00000358511 RSPH1Q8WYR4 309 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 FAM111AQ96PZ2 611 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 HACD3Q9P035 362 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 ATXN10Q9UBB4 475 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 APPL1Q9UKG1 709 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 CAPN6Q9Y6Q1 641 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 ZCCHC11Q5TAX3 1644 aaKnown RBP9.15□□□□□ -0.94
COL6A6-201ENST00000358511 SLC16A2P36021 539 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 KRT76Q01546 638 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 RGS21Q2M5E4 152 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 CENPTQ96BT3 561 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 LRRC39Q96DD0 335 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 AKT3Q9Y243 479 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 ZFYVE16Q7Z3T8 1539 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 HADHAP40939 763 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 FOXD4Q12950 439 aaPredicted RBP9.15□□□□□ -0.94
COL6A6-201ENST00000358511 KRT72Q14CN4 511 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 FAM162AQ96A26 154 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 WNK4Q96J92 1243 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 ABCF3Q9NUQ8 709 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 MYRFQ9Y2G1 1151 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 CES2O00748 559 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 TMEM253P0C7T8 217 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 GTF2IP78347 998 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 SGSM1Q2NKQ1 1148 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 FAM102AQ5T9C2 384 aaPredicted RBP9.15□□□□□ -0.94
COL6A6-201ENST00000358511 KHDRBS2Q5VWX1 349 aaKnown RBP9.15□□□□□ -0.94
COL6A6-201ENST00000358511 C1orf228Q6PIY5 440 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms