RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 HIST1H2AJQ99878 128 aa10.83□□□□□ -0.67
SPTAN1-201ENST00000358161 H2AFJQ9BTM1 129 aa10.83□□□□□ -0.67
SPTAN1-201ENST00000358161 ENTPD7Q9NQZ7 604 aa10.83□□□□□ -0.67
SPTAN1-201ENST00000358161 NDE1Q9NXR1 346 aa10.83□□□□□ -0.67
SPTAN1-201ENST00000358161 DBR1Q9UK59 544 aaKnown RBP10.83□□□□□ -0.67
SPTAN1-201ENST00000358161 NDUFS3O75489 264 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 B3GAT3O94766 335 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 ARP10275 920 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 ITIH2P19823 946 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 ESRRGP62508 458 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 PPATQ06203 517 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 SFSWAPQ12872 951 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 GRB10Q13322 594 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 FBXO38Q6PIJ6 1188 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 UBA3Q8TBC4 463 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 SYTL5Q8TDW5 730 aaPredicted RBP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 YME1L1Q96TA2 773 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 AGPAT5Q9NUQ2 364 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 PRG3Q9Y2Y8 225 aaPredicted RBP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 SLC30A1Q9Y6M5 507 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 COL3A1P02461 1466 aaPredicted RBP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 SESN2P58004 480 aaPredicted RBP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 EFTUD2Q15029 972 aaKnown RBP eCLIP10.83□□□□□ -0.684e-6■■■□□ 15.1
SPTAN1-201ENST00000358161 CHSY1Q86X52 802 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 CLMNQ96JQ2 1002 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 ELAC2Q9BQ52 826 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 RAB6BQ9NRW1 208 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.83□□□□□ -0.681e-6■■□□□ 12.7
SPTAN1-201ENST00000358161 CPSF2Q9P2I0 782 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 MROH1Q8NDA8 1641 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 MED24O75448 989 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 LMNAP02545 664 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 PNMA6AP0CW24 399 aaPredicted RBP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 BRAFP15056 766 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 KLRC1P26715 233 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 AKT1P31749 480 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 BYSLQ13895 437 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 MEI1Q5TIA1 1274 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 ANKS3Q6ZW76 656 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 IDI2Q9BXS1 227 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 METTL5Q9NRN9 209 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 XPO7Q9UIA9 1087 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 TCRBV5S4A2TA0A5A2 114 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 PRPF4O43172 522 aaKnown RBP eCLIP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 GRAP2O75791 330 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 THP07101 528 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 SEC23AQ15436 765 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 CYP4A22Q5TCH4 519 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 USP49Q70CQ1 688 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 ERGIC2Q96RQ1 377 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 CYTH2Q99418 400 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 CHP1Q99653 195 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 PI4K2AQ9BTU6 479 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 KLK14Q9P0G3 267 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 AMACRQ9UHK6 382 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 DPP7Q9UHL4 492 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 BRD2P25440 801 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 PGM5Q15124 567 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 AGAP3Q96P47 875 aa10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 TPX2Q9ULW0 747 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-201ENST00000358161 CCDC195A0A1B0GUA6 201 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 C2CD2LO14523 706 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 DIAPH2O60879 1101 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 SHMT1P34896 483 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 SERPINB9P50453 376 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 RAB27AP51159 221 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 CLCN3P51790 818 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 SPATA18Q8TC71 538 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 MTBPQ96DY7 904 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 KRT82Q9NSB4 513 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 KANSL3Q9P2N6 904 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 ZFP69BQ9UJL9 534 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 VWA5AO00534 786 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 SPAG6O75602 509 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 URODP06132 367 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 VIL1P09327 827 aaKnown RBP10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 KITP10721 976 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 GFAPP14136 432 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 ATICP31939 592 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 GGCXP38435 758 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 NPTX2P47972 431 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 LHX1P48742 406 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 RPL10AP62906 217 aaKnown RBP10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 TWF1Q12792 350 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 MAPRE2Q15555 327 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 KIZQ2M2Z5 673 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 NIPA1Q7RTP0 329 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 KDELC2Q7Z4H8 507 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 LZICQ8WZA0 190 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 PTPRN2Q92932 1015 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 ARHGEF38Q9NXL2 777 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 CFAP99D6REC4 459 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 GYG2O15488 501 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 HOXA10P31260 410 aaPredicted RBP10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 TEDDM1Q5T9Z0 273 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 ACAD10Q6JQN1 1059 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 NRBF2Q96F24 287 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 NFIBO00712 420 aa10.82□□□□□ -0.68
SPTAN1-201ENST00000358161 VTNP04004 478 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms