RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 ANTXR2P58335 489 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 KCNV1Q6PIU1 500 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 CFAP36Q96G28 342 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 GPS1Q13098 491 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 SLC39A6Q13433 755 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 RRP1BQ14684 758 aaKnown RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TRIM56Q9BRZ2 755 aaKnown RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 MYMKA6NI61 221 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 RAP1GDS1P52306 607 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 INPP5AQ14642 412 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 KYQ8NBH2 561 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 BORCS5Q969J3 196 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 HSD3B7Q9H2F3 369 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ZBTB3Q9H5J0 574 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 PAX7P23759 505 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TRIP13Q15645 432 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 DCLK3Q9C098 648 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 DPH5Q9H2P9 285 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 UNC45AQ9H3U1 944 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 A0A0G2JND7 137 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ARHGEF37A1IGU5 675 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 KIF28PB7ZC32 967 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 STX1BP61266 288 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 DPY19L2Q6NUT2 758 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ZNF420Q8TAQ5 688 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ZBTB10Q96DT7 871 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 WDR12Q9GZL7 423 aaKnown RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 GOLPH3Q9H4A6 298 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 LMTK3Q96Q04 1460 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 CROCCQ5TZA2 2017 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 CYTH1Q15438 398 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 NOP9Q86U38 636 aaKnown RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ZNF564Q8TBZ8 553 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TRIM10Q9UDY6 481 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 MYRFQ9Y2G1 1151 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 GPC6Q9Y625 555 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 CAMTA2O94983 1202 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TMOD1P28289 359 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TRIM16LQ309B1 348 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TMEM110Q86TL2 294 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 SCAIQ8N9R8 606 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 EPB41L4AQ9HCS5 686 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ANKRD6Q9Y2G4 727 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 PTPN22Q9Y2R2 807 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 B2RBV5 119 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 C1QBPQ07021 282 aaKnown RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 PLS1Q14651 629 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ZNF829Q3KNS6 432 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 SAMD4BQ5PRF9 694 aaKnown RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 IDH3BO43837 385 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 UQCRBP14927 111 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ALDH1B1P30837 517 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 EPS8Q12929 822 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TMEM179Q6ZVK1 233 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 GALNT8Q9NY28 637 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 GSNP06396 782 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TAB1Q15750 504 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 RFX4Q33E94 735 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 RNF169Q8NCN4 708 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 CAAP1Q9H8G2 361 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TMED5Q9Y3A6 229 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 REXO2Q9Y3B8 237 aaKnown RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 EVPLLA8MZ36 301 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TPD52P55327 224 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ANGPT1Q15389 498 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 PKN1Q16512 942 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 SFR1Q86XK3 245 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TBC1D10CQ8IV04 446 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ANKRD13AQ8IZ07 590 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 GDAP1Q8TB36 358 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 MDM1Q8TC05 714 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 RNF217Q8TC41 542 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 MTMR8Q96EF0 704 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TTYH3Q9C0H2 523 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 GGA1Q9UJY5 639 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 R3HDM2Q9Y2K5 976 aaKnown RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 POU5F1Q01860 360 aaKnown RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 GRPEL2Q8TAA5 225 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 MRIQ9BWK5 157 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 DPPA5A6NC42 116 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 C6orf229H3BNL8 230 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 DTNBO60941 627 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 MAP4P27816 1152 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 KCNQ4P56696 695 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 EPHA7Q15375 998 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 RC3H1Q5TC82 1133 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 PPP4R4Q6NUP7 873 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 APTXQ7Z2E3 356 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 LRRC57Q8N9N7 239 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 E2F7Q96AV8 911 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 APOL4Q9BPW4 351 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 IGSF9Q9P2J2 1179 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 WBP11Q9Y2W2 641 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 NUB1Q9Y5A7 615 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 H0YGN5 161 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 VCAM1P19320 739 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 USP49Q70CQ1 688 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 LINC00523Q86TU6 105 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 LRRN4CLQ8ND94 238 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 FADS3Q9Y5Q0 445 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms