RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 DUPD1Q68J44 220 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 LENG9Q96B70 501 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 SHCBP1LQ9BZQ2 653 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 DENND2DQ9H6A0 471 aaPredicted RBP10.53□□□□□ -0.72
RNF40-202ENST00000357890 WDR35Q9P2L0 1181 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 PIK3CDO00329 1044 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 STK10O94804 968 aaKnown RBP10.53□□□□□ -0.72
RNF40-202ENST00000357890 PAEPP09466 180 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 TPBGLP0DKB5 382 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 RARGP13631 454 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 ITGA8P53708 1063 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 USP46P62068 366 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 AP2B1P63010 937 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 SLC44A4Q53GD3 710 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 SLC47A2Q86VL8 602 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 PALM2Q8IXS6 379 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 LARGE2Q8N3Y3 721 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 PRELID2Q8N945 189 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 SMC1BQ8NDV3 1235 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 ATP8B4Q8TF62 1192 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 TLCD1Q96CP7 247 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 PRMT6Q96LA8 375 aaPredicted RBP10.53□□□□□ -0.72
RNF40-202ENST00000357890 IMPG2Q9BZV3 1241 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 UNC45AQ9H3U1 944 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 RGS17Q9UGC6 210 aaPredicted RBP10.53□□□□□ -0.72
RNF40-202ENST00000357890 LZTS1Q9Y250 596 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 PIAS1O75925 651 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 PGM3O95394 542 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 RFC1P35251 1148 aaPredicted RBP10.53□□□□□ -0.72
RNF40-202ENST00000357890 KIF22Q14807 665 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 MFSD4BQ5TF39 518 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 LMBRD2Q68DH5 695 aaPredicted RBP10.53□□□□□ -0.72
RNF40-202ENST00000357890 GRAMD4Q6IC98 578 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 LVRNQ6Q4G3 990 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 ARHGEF19Q8IW93 802 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 RASGEF1CQ8N431 466 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.53□□□□□ -0.72
RNF40-202ENST00000357890 CCDC110Q8TBZ0 833 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 RIT2Q99578 217 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 ARMCX1Q9P291 453 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 KLRG2A4D1S0 409 aaPredicted RBP10.52□□□□□ -0.72
RNF40-202ENST00000357890 PSMD10O75832 226 aa10.52□□□□□ -0.72
RNF40-202ENST00000357890 HOXD13P35453 343 aa10.52□□□□□ -0.72
RNF40-202ENST00000357890 KHDC1Q4VXA5 237 aaKnown RBP10.52□□□□□ -0.72
RNF40-202ENST00000357890 BTNL9Q6UXG8 535 aa10.52□□□□□ -0.72
RNF40-202ENST00000357890 ANKMY2Q8IV38 441 aa10.52□□□□□ -0.72
RNF40-202ENST00000357890 RIBC1Q8N443 379 aaPredicted RBP10.52□□□□□ -0.72
RNF40-202ENST00000357890 C1orf131Q8NDD1 294 aaKnown RBP10.52□□□□□ -0.72
RNF40-202ENST00000357890 CPA5Q8WXQ8 436 aa10.52□□□□□ -0.72
RNF40-202ENST00000357890 SLC5A5Q92911 643 aa10.52□□□□□ -0.72
RNF40-202ENST00000357890 MAGEB18Q96M61 343 aa10.52□□□□□ -0.72
RNF40-202ENST00000357890 UBE2OQ9C0C9 1292 aaKnown RBP10.52□□□□□ -0.72
RNF40-202ENST00000357890 MIS12Q9H081 205 aa10.52□□□□□ -0.72
RNF40-202ENST00000357890 SIX2Q9NPC8 291 aa10.52□□□□□ -0.72
RNF40-202ENST00000357890 GPRC5CQ9NQ84 441 aa10.52□□□□□ -0.72
RNF40-202ENST00000357890 KMT5AQ9NQR1 393 aa10.52□□□□□ -0.72
RNF40-202ENST00000357890 ARHGEF3Q9NR81 526 aa10.52□□□□□ -0.72
RNF40-202ENST00000357890 FEM1BQ9UK73 627 aa10.52□□□□□ -0.72
RNF40-202ENST00000357890 AGTPBP1Q9UPW5 1226 aa10.52□□□□□ -0.72
RNF40-202ENST00000357890 NAALADL1Q9UQQ1 740 aa10.52□□□□□ -0.72
RNF40-202ENST00000357890 ZWINTO95229 277 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 QARSP47897 775 aaKnown RBP10.52□□□□□ -0.73
RNF40-202ENST00000357890 IGBP1P78318 339 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 SLC34A1Q06495 639 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 TRIP10Q15642 601 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 KCTD21Q4G0X4 260 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 HSP90AA5PQ58FG0 334 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 KRT39Q6A163 491 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 TRMT10CQ7L0Y3 403 aaKnown RBP10.52□□□□□ -0.73
RNF40-202ENST00000357890 CKAP2Q8WWK9 683 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 CFAP57Q96MR6 1250 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 C11orf70Q9BRQ4 267 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 SIKE1Q9BRV8 207 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 PI4K2AQ9BTU6 479 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 WDR18Q9BV38 432 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 KIFC3Q9BVG8 833 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 COG5Q9UP83 839 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 FRMPD4Q14CM0 1322 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 MYH1P12882 1939 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 NPTXRO95502 500 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 PTPN4P29074 926 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 JAM2P57087 298 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 IZUMO3Q5VZ72 239 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 SH3BP5LQ7L8J4 393 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 DNAJC1Q96KC8 554 aaKnown RBP10.52□□□□□ -0.73
RNF40-202ENST00000357890 FBXO28Q9NVF7 368 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 TMX2Q9Y320 296 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 NHSQ6T4R5 1651 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 DENND3A2RUS2 1198 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 NPM3O75607 178 aaKnown RBP10.52□□□□□ -0.73
RNF40-202ENST00000357890 RAD17O75943 681 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 GGPS1O95749 300 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 ECHS1P30084 290 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 ATXN3P54252 364 aaPredicted RBP10.52□□□□□ -0.73
RNF40-202ENST00000357890 FKBP1AP62942 108 aaKnown RBP10.52□□□□□ -0.73
RNF40-202ENST00000357890 DSG1Q02413 1049 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 PPP3CAQ08209 521 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 RFWD3Q6PCD5 774 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 SLFN11Q7Z7L1 901 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 CBWD2Q8IUF1 395 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms