RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 SAE1Q9UBE0 346 aaPredicted RBP7.21□□□□□ -1.26
RTN4-203ENST00000357376 DNPEPQ9ULA0 475 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 TTLL3Q9Y4R7 772 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 ADAMTSL3P82987 1691 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 SPDYE2BA6NHP3 402 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 PRPSAP2O60256 369 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 ATP9AO75110 1047 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 GRAP2O75791 330 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 ATP5HO75947 161 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 CBX6O95503 412 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 ZBED1O96006 694 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 SPDYE6P0CI01 402 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 CAP2P40123 477 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 MYBPC2Q14324 1141 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 SPRED3Q2MJR0 410 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 TTLL6Q8N841 843 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 C7orf31Q8N865 590 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 FAM161BQ96MY7 647 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 TSNARE1Q96NA8 513 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 WRNIP1Q96S55 665 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 FBXO40Q9UH90 709 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 SMG5Q9UPR3 1016 aaKnown RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 PIK3CDO00329 1044 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 BANF1O75531 89 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 SAT1P21673 171 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 PAX7P23759 505 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 CTCFP49711 727 aaPredicted RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 POLE2P56282 527 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 EIF3EP60228 445 aaKnown RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 PDE1BQ01064 536 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 KLHL38Q2WGJ6 581 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 WDR72Q3MJ13 1102 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 ZNF667Q5HYK9 610 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 RSBN1LQ6PCB5 846 aaPredicted RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 MFSD7Q6UXD7 560 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 SDCCAG8Q86SQ7 713 aaPredicted RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 FAM71DQ8N9W8 422 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 FBXO41Q8TF61 875 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 ZBTB45Q96K62 511 aaPredicted RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 GBP5Q96PP8 586 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 MPHOSPH6Q99547 160 aaKnown RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 ADPGKQ9BRR6 497 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 TIPINQ9BVW5 301 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 ATXN2Q99700 1313 aaKnown RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 M0QYV0 167 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 WDR46O15213 610 aaKnown RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 EXTL3O43909 919 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 RASSF9O75901 435 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 KRT16P08779 473 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 MUTP22033 750 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 SSTR1P30872 391 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 PTGIRP43119 386 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 CDH6P55285 790 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 NLRP11P59045 1033 aaKnown RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 RNASELQ05823 741 aaKnown RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 KDSRQ06136 332 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 CCNG2Q16589 344 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 ZNF568Q3ZCX4 644 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 SPDYCQ5MJ68 293 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 FAM102AQ5T9C2 384 aaPredicted RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 FAXCQ5TGI0 409 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 TATDN1Q6P1N9 297 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 SLC9A9Q8IVB4 645 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 MAP7D3Q8IWC1 876 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 ATXN2LQ8WWM7 1075 aaKnown RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 TTC1Q99614 292 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 TSSK1BQ9BXA7 367 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 ANKEF1Q9NU02 776 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 SPATS2LQ9NUQ6 558 aaKnown RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 XPO7Q9UIA9 1087 aaKnown RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 G3BP2Q9UN86 482 aaKnown RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 ZMYM2Q9UBW7 1377 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 CYP1A2P05177 515 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 SERPINB6P35237 376 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 PSMC4P43686 418 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 JAG1P78504 1218 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 XRCC4Q13426 336 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 SLC15A2Q16348 729 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 MAPK6Q16659 721 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 UBAP2Q5T6F2 1119 aaKnown RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 RASIP1Q5U651 963 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 DCAF15Q66K64 600 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 NLRP9Q7RTR0 991 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 MTDHQ86UE4 582 aaKnown RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 CCDC125Q86Z20 511 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 C4orf19Q8IY42 314 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 DAW1Q8N136 415 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 EMC1Q8N766 993 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 RNF149Q8NC42 400 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 SMC1BQ8NDV3 1235 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 CKAP2Q8WWK9 683 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 SPOCK2Q92563 424 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 ATP2A3Q93084 1043 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 MBOAT7Q96N66 472 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 PDCD2LQ9BRP1 358 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 MYLK2Q9H1R3 596 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 SMYD3Q9H7B4 428 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 SENP1Q9P0U3 644 aa7.2□□□□□ -1.26
RTN4-203ENST00000357376 CPSF2Q9P2I0 782 aaKnown RBP7.2□□□□□ -1.26
RTN4-203ENST00000357376 STOML1Q9UBI4 398 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms