RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 APPL1Q9UKG1 709 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 TK2O00142 265 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 ATP9AO75110 1047 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 ZNF23P17027 643 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 TFE3P19532 575 aaPredicted RBP11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 COPAP53621 1224 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 CCNA1P78396 465 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 LMBRD2Q68DH5 695 aaPredicted RBP11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 SHC4Q6S5L8 630 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 C3orf20Q8ND61 904 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 PPP1R14AQ96A00 147 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 ECSITQ9BQ95 431 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 TMEM117Q9H0C3 514 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 RAD18Q9NS91 495 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 ZMYND8Q9ULU4 1186 aaPredicted RBP11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 STAP1Q9ULZ2 295 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 ITIH6Q6UXX5 1313 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 H3BQF6 201 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 PSMD14O00487 310 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 ZNF189O75820 626 aaPredicted RBP11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 FLT3P36888 993 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 FEN1P39748 380 aaKnown RBP11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 SARSP49591 514 aaKnown RBP11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 OTOAQ7RTW8 1153 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 LRRC71Q8N4P6 559 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 POLR3FQ9H1D9 316 aaPredicted RBP11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 PLEKHA5Q9HAU0 1116 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 KRT84Q9NSB2 600 aa11.52□□□□□ -0.56
GTF3C1-201ENST00000356183 PIPSLA2A3N6 862 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 SNPHO15079 494 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 KCTD21Q4G0X4 260 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 VN1R5Q7Z5H4 357 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 APOL5Q9BWW9 433 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 PIH1D3Q9NQM4 214 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 RGL1Q9NZL6 768 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 L1RE1Q9UN81 338 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 MLH3Q9UHC1 1453 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 XDHP47989 1333 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 TRIM43BA6NCK2 446 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 NNMTP40261 264 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 TAP1Q03518 808 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 CSTF3Q12996 717 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 MAPK6Q16659 721 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 WDR93Q6P2C0 686 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 RAD9BQ6WBX8 426 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 PODNQ7Z5L7 613 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 TSPAN17Q96FV3 270 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 CPVLQ9H3G5 476 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 SASH1O94885 1247 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 TXNRD1Q16881 649 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 ERFEQ4G0M1 354 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 DDX53Q86TM3 631 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 TERB1Q8NA31 727 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 ASAP3Q8TDY4 903 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 PIF1Q9H611 641 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 SIX5Q8N196 739 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 ARHGEF26Q96DR7 871 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 MCEEQ96PE7 176 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 PARVBQ9HBI1 364 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 KIAA1586Q9HCI6 787 aa11.52□□□□□ -0.57
GTF3C1-201ENST00000356183 STK36Q9NRP7 1315 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 RPS7P62081 194 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 DNAJC3Q13217 504 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 KDM7AQ6ZMT4 941 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 METTL16Q86W50 562 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 LRRC34Q8IZ02 419 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 C10orf53Q8N6V4 93 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 HPS3Q969F9 1004 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 E2F7Q96AV8 911 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 RAD21L1Q9H4I0 556 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 SYNDIG1Q9H7V2 258 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 ATP6V1HQ9UI12 483 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 LMTK3Q96Q04 1460 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 NDUFS3O75489 264 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 APBA3O96018 575 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 ITIH2P19823 946 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 ITGA8P53708 1063 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 CSE1LP55060 971 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 NR1I3Q14994 352 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 SH3RF3Q8TEJ3 882 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 PNMA8BQ9ULN7 279 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 PHTF1Q9UMS5 762 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 ZNF839A8K0R7 811 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 A8MXQ7 604 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 ERVV-2B6SEH9 535 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 NMT2O60551 498 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 EIF2S1P05198 315 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 SCTRP47872 440 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 MROH9Q5TGP6 573 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 TADA1Q96BN2 335 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 GPR101Q96P66 508 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 CDHR2Q9BYE9 1310 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 C1orf232A0A0U1RR37 186 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 HIST1H2AGP0C0S8 130 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 HIST1H2ADP20671 130 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 MAGEA4P43358 317 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 KLK7P49862 253 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 TWF2Q6IBS0 349 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 PRUNE1Q86TP1 453 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms