RNA–Protein interactions for RNA: ENST00000355522.5

C2CD4A-201, Transcript of C2 calcium dependent domain containing 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD4A, Length 3,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4A-201ENST00000355522 PYROXD1Q8WU10 500 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 C11orf70Q9BRQ4 267 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 MANSC1Q9H8J5 431 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 C10orf88Q9H8K7 445 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 PREBQ9HCU5 417 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 LMCD1Q9NZU5 365 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 PPP1R1BQ9UD71 204 aaPredicted RBP17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 SMG5Q9UPR3 1016 aaKnown RBP17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 DNAH12Q6ZR08 3092 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 hCG_1984214I3L0E3 225 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 PGM3O95394 542 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 MT-ND3P03897 115 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 EFTUD2Q15029 972 aaKnown RBP eCLIP17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 DBN1Q16643 649 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 AOC3Q16853 763 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 CNPY1Q3B7I2 92 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 ZNF713Q8N859 430 aaPredicted RBP17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 C10orf82Q8WW14 230 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 DNAJC1Q96KC8 554 aaKnown RBP17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 PI4K2AQ9BTU6 479 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 AMNQ9BXJ7 453 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 DCLK3Q9C098 648 aa17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 WRAP73Q9P2S5 460 aaPredicted RBP17.12■□□□□ 0.33
C2CD4A-201ENST00000355522 CCDC88AQ3V6T2 1871 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 BCORQ6W2J9 1755 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 A6NJR5 290 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 GAP43P17677 238 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 SSTR1P30872 391 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 MAN1A1P33908 653 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 RTP1P59025 263 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 DSG1Q02413 1049 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 NR1H3Q13133 447 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 SLC5A9Q2M3M2 681 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 RIBC1Q8N443 379 aaPredicted RBP17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 BBOF1Q8ND07 529 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 SH3TC2Q8TF17 1288 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 TRAPPC9Q96Q05 1148 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 ADGRA3Q8IWK6 1321 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 GTPBP10A4D1E9 387 aaKnown RBP17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 CAV1Q03135 178 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 PPP3CAQ08209 521 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 FOXB2Q5VYV0 432 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 DPY19L2P1Q6NXN4 242 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 SMC1BQ8NDV3 1235 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 PIP4K2CQ8TBX8 421 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 FAM111AQ96PZ2 611 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 CBWD1Q9BRT8 395 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 LRRC19Q9H756 370 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 GRID1Q9ULK0 1009 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 SLC45A4Q5BKX6 768 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 MAK16Q9BXY0 300 aaKnown RBP17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 ASB3Q9Y575 518 aa17.11■□□□□ 0.33
C2CD4A-201ENST00000355522 MEI4A8MW99 385 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 ATP6V1B1P15313 513 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 BGNP21810 368 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 MFAP3P55082 362 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 MPP4Q96JB8 637 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 ZNF668Q96K58 619 aaPredicted RBP17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 OSBPL8Q9BZF1 889 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 FHDC1Q9C0D6 1143 aaPredicted RBP17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 DMAP1Q9NPF5 467 aaPredicted RBP17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 TOPORSQ9NS56 1045 aaPredicted RBP17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 SLC17A7Q9P2U7 560 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 I3L4J1 428 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 ABLIM1O14639 778 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 LPXNO60711 386 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 EYA4O95677 639 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 HNRNPCP07910 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 NSFP46459 744 aaKnown RBP17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 AP2B1P63010 937 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 PYDC1Q8WXC3 89 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 MTBPQ96DY7 904 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 ETNK2Q9NVF9 386 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 A0A1B0GUL6 1792 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 KAT6AQ92794 2004 aa17.1■□□□□ 0.33
C2CD4A-201ENST00000355522 FAM200BP0CF97 657 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 GPATCH4Q5T3I0 446 aaKnown RBP17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 CENPUQ71F23 418 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 ALYREFQ86V81 257 aaKnown RBP17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 ENDOVQ8N8Q3 282 aaKnown RBP17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 EPS8L1Q8TE68 723 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 HERPUD2Q9BSE4 406 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 TAS2R1Q9NYW7 299 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 FAM237BA0A1B0GVD1 139 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 FCHO1O14526 889 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 TRPA1O75762 1119 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 TPP2P29144 1249 aaPredicted RBP17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 USP46P62068 366 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 FOXR2Q6PJQ5 311 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 SH3BP5LQ7L8J4 393 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 RHPN2Q8IUC4 686 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 MMP10P09238 476 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 PSMC4P43686 418 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 YWHAGP61981 247 aaKnown RBP eCLIP17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 TMPRSS15P98073 1019 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 AP1B1Q10567 949 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 MOGSQ13724 837 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 PTK6Q13882 451 aa17.09■□□□□ 0.33
C2CD4A-201ENST00000355522 TFDP1Q14186 410 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms