RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 CST8O60676 142 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 GYS1P13807 737 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 ITGA8P53708 1063 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 STX3Q13277 289 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 CD302Q8IX05 232 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 ZSWIM1Q9BR11 485 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 RIOX1Q9H6W3 641 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 SPATA31D1Q6ZQQ2 1576 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 COL3A1P02461 1466 aaPredicted RBP17.14■□□□□ 0.33
SHTN1-202ENST00000355371 NAMPTP43490 491 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 GIT2Q14161 759 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 LBRQ14739 615 aaKnown RBP17.14■□□□□ 0.33
SHTN1-202ENST00000355371 E2F4Q16254 413 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 NTRK3Q16288 839 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 BOLA3Q53S33 107 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 PI4K2AQ9BTU6 479 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 ING2Q9H160 280 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 PCDHB8Q9UN66 801 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 RNF103-CHMP3A0A140T963 221 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 ZNF197O14709 1029 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 ATMINO43313 823 aaPredicted RBP17.14■□□□□ 0.33
SHTN1-202ENST00000355371 GARTP22102 1010 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 CARSP49589 748 aaKnown RBP17.14■□□□□ 0.33
SHTN1-202ENST00000355371 CPT1AP50416 773 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 ERVK-24P63145 666 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 HIC1Q14526 733 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 GJB7Q6PEY0 223 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 PPIL6Q8IXY8 311 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 SMARCAL1Q9NZC9 954 aa17.14■□□□□ 0.33
SHTN1-202ENST00000355371 ZBBXA8MT70 800 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 IL1R1P14778 569 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 SPRP35270 261 aaPredicted RBP17.13■□□□□ 0.33
SHTN1-202ENST00000355371 CUL3Q13618 768 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 SLC15A2Q16348 729 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 SLC13A5Q86YT5 568 aaPredicted RBP17.13■□□□□ 0.33
SHTN1-202ENST00000355371 ATXN7L3BQ96GX2 97 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 AGAP3Q96P47 875 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 TRIM45Q9H8W5 580 aaPredicted RBP17.13■□□□□ 0.33
SHTN1-202ENST00000355371 LSM7Q9UK45 103 aaKnown RBP17.13■□□□□ 0.33
SHTN1-202ENST00000355371 TMX2Q9Y320 296 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 GOLGA8RI6L899 631 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 DDX5P17844 614 aaKnown RBP17.13■□□□□ 0.33
SHTN1-202ENST00000355371 GNL1P36915 607 aaPredicted RBP17.13■□□□□ 0.33
SHTN1-202ENST00000355371 PTK7Q13308 1070 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 RNF217Q8TC41 542 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 CALML6Q8TD86 181 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 EIF2AQ9BY44 585 aaKnown RBP17.13■□□□□ 0.33
SHTN1-202ENST00000355371 PIDD1Q9HB75 910 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 FAM49BQ9NUQ9 324 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 MOSPD1Q9UJG1 213 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 DBR1Q9UK59 544 aaKnown RBP17.13■□□□□ 0.33
SHTN1-202ENST00000355371 TCRBV5S4A2TA0A5A2 114 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 OGTO15294 1046 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 SNRPAP09012 282 aaKnown RBP17.13■□□□□ 0.33
SHTN1-202ENST00000355371 ABCE1P61221 599 aaKnown RBP17.13■□□□□ 0.33
SHTN1-202ENST00000355371 ZBTB41Q5SVQ8 909 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 NOA1Q8NC60 698 aaKnown RBP17.13■□□□□ 0.33
SHTN1-202ENST00000355371 CATSPER1Q8NEC5 780 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 ZIM3Q96PE6 472 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 THAP2Q9H0W7 228 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 CCL15-CCL14A0A0B4J2E2 113 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 POLBP06746 335 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 PGM1P36871 562 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 CACNB2Q08289 660 aaPredicted RBP17.13■□□□□ 0.33
SHTN1-202ENST00000355371 MYBPC2Q14324 1141 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 CCL15Q16663 113 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 DNAL1Q4LDG9 190 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 ICA1LQ8NDH6 482 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 PTPRN2Q92932 1015 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 L2HGDHQ9H9P8 463 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 CYP4F11Q9HBI6 524 aa17.13■□□□□ 0.33
SHTN1-202ENST00000355371 METTL5Q9NRN9 209 aaKnown RBP17.13■□□□□ 0.33
SHTN1-202ENST00000355371 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.13■□□□□ 0.33
SHTN1-202ENST00000355371 UBQLN1Q9UMX0 589 aaKnown RBP17.13■□□□□ 0.33
SHTN1-202ENST00000355371 GRIN3BO60391 1043 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 CTSHP09668 335 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 RBP3P10745 1247 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 GFAPP14136 432 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 BRD2P25440 801 aaKnown RBP17.12■□□□□ 0.33
SHTN1-202ENST00000355371 TAF6P49848 677 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 ZNF484Q5JVG2 852 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 PRMT6Q96LA8 375 aaPredicted RBP17.12■□□□□ 0.33
SHTN1-202ENST00000355371 KLC4Q9NSK0 619 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 ARHGEF38Q9NXL2 777 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 PSD3Q9NYI0 1048 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 KIAA1257Q9ULG3 409 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 KCNA2P16389 499 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 RARS2Q5T160 578 aaKnown RBP17.12■□□□□ 0.33
SHTN1-202ENST00000355371 TTC39BQ5VTQ0 682 aaPredicted RBP17.12■□□□□ 0.33
SHTN1-202ENST00000355371 SAMD7Q7Z3H4 446 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 AGGF1Q8N302 714 aaeCLIP17.12■□□□□ 0.336e-22■□□□□ 11.2
SHTN1-202ENST00000355371 TEX12Q9BXU0 123 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 ALG13Q9NP73 1137 aaKnown RBP17.12■□□□□ 0.33
SHTN1-202ENST00000355371 AIPL1Q9NZN9 384 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 DNAJC6O75061 913 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 CENPPQ6IPU0 288 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 GLB1LQ6UWU2 654 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 C3orf62Q6ZUJ4 267 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 TMC2Q8TDI7 906 aa17.12■□□□□ 0.33
SHTN1-202ENST00000355371 ACER1Q8TDN7 264 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms