RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 HEMGNQ9BXL5 484 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 CDC42EP4Q9H3Q1 356 aaKnown RBP23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 ANAPC5Q9UJX4 755 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 TMEM191CA6NGB0 347 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 CXCL11O14625 94 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 TMEM191BP0C7N4 346 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 SLC26A2P50443 739 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 CEP128Q6ZU80 1094 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 ANKRD13AQ8IZ07 590 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 OTUD5Q96G74 571 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 SERPINB12Q96P63 405 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 MTMR12Q9C0I1 747 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 AAASQ9NRG9 546 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 USTQ9Y2C2 406 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 NEU2Q9Y3R4 380 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 TTLL13PA6NNM8 815 aa23.6■■□□□ 1.37
NKX2-1-201ENST00000354822 NF2P35240 595 aa23.6■■□□□ 1.37
NKX2-1-201ENST00000354822 SSR1P43307 286 aaKnown RBP23.6■■□□□ 1.37
NKX2-1-201ENST00000354822 ITGA8P53708 1063 aa23.6■■□□□ 1.37
NKX2-1-201ENST00000354822 MYL6P60660 151 aa23.6■■□□□ 1.37
NKX2-1-201ENST00000354822 YWHAEP62258 255 aaKnown RBP23.6■■□□□ 1.37
NKX2-1-201ENST00000354822 MKRN4PQ13434 485 aaPredicted RBP23.6■■□□□ 1.37
NKX2-1-201ENST00000354822 AUHQ13825 339 aaKnown RBP23.6■■□□□ 1.37
NKX2-1-201ENST00000354822 TFDP1Q14186 410 aa23.6■■□□□ 1.37
NKX2-1-201ENST00000354822 C6orf89Q6UWU4 347 aa23.6■■□□□ 1.37
NKX2-1-201ENST00000354822 EEPD1Q7L9B9 569 aa23.6■■□□□ 1.37
NKX2-1-201ENST00000354822 CCHCR1Q8TD31 782 aa23.6■■□□□ 1.37
NKX2-1-201ENST00000354822 CISHQ9NSE2 258 aa23.6■■□□□ 1.37
NKX2-1-201ENST00000354822 EIF4BP23588 611 aaKnown RBP23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 ATP5DP30049 168 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 C9orf131Q5VYM1 1079 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 TSHZ1Q6ZSZ6 1077 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 MICALL1Q8N3F8 863 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 CHMP6Q96FZ7 201 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 FOXP3Q9BZS1 431 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 DDX20Q9UHI6 824 aaKnown RBP23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 PCDHGC3Q9UN70 934 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 R3HDM2Q9Y2K5 976 aaKnown RBP23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 SMIM23A6NLE4 172 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 ABLIM1O14639 778 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 TTC4O95801 387 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 CHN1P15882 459 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 COPS2P61201 443 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 IFI35P80217 286 aaPredicted RBP23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 NFX1Q12986 1120 aaKnown RBP23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 CPLX4Q7Z7G2 160 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 MDM1Q8TC05 714 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 EPS8L3Q8TE67 593 aaKnown RBP23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 FAM212AQ96EL1 285 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 CDCA5Q96FF9 252 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 SELENOSQ9BQE4 189 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 ASCC2Q9H1I8 757 aaPredicted RBP23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 CEP83Q9Y592 693 aa23.59■■□□□ 1.37
NKX2-1-201ENST00000354822 SPDYE5A6NIY4 337 aa23.58■■□□□ 1.37
NKX2-1-201ENST00000354822 ACKR2O00590 384 aa23.58■■□□□ 1.37
NKX2-1-201ENST00000354822 PROZP22891 400 aa23.58■■□□□ 1.37
NKX2-1-201ENST00000354822 SSTR3P32745 418 aaPredicted RBP23.58■■□□□ 1.37
NKX2-1-201ENST00000354822 CDH5P33151 784 aaPredicted RBP23.58■■□□□ 1.37
NKX2-1-201ENST00000354822 TTC31Q49AM3 519 aaPredicted RBP23.58■■□□□ 1.37
NKX2-1-201ENST00000354822 GKAP1Q5VSY0 366 aaPredicted RBP23.58■■□□□ 1.37
NKX2-1-201ENST00000354822 MPZL3Q6UWV2 235 aa23.58■■□□□ 1.37
NKX2-1-201ENST00000354822 CLMNQ96JQ2 1002 aa23.58■■□□□ 1.37
NKX2-1-201ENST00000354822 ADAM7Q9H2U9 754 aa23.58■■□□□ 1.37
NKX2-1-201ENST00000354822 ZBTB42B2RXF5 422 aa23.58■■□□□ 1.36
NKX2-1-201ENST00000354822 B4GALT4O60513 344 aa23.58■■□□□ 1.36
NKX2-1-201ENST00000354822 CNMDO75829 334 aa23.58■■□□□ 1.36
NKX2-1-201ENST00000354822 TJP3O95049 919 aa23.58■■□□□ 1.36
NKX2-1-201ENST00000354822 TNNC2P02585 160 aa23.58■■□□□ 1.36
NKX2-1-201ENST00000354822 MARK3P27448 753 aa23.58■■□□□ 1.36
NKX2-1-201ENST00000354822 PIGHQ14442 188 aaPredicted RBP23.58■■□□□ 1.36
NKX2-1-201ENST00000354822 PLCB4Q15147 1175 aa23.58■■□□□ 1.36
NKX2-1-201ENST00000354822 HSDL1Q3SXM5 330 aa23.58■■□□□ 1.36
NKX2-1-201ENST00000354822 DAB2IPQ5VWQ8 1189 aa23.58■■□□□ 1.36
NKX2-1-201ENST00000354822 DNAJC24Q6P3W2 148 aa23.58■■□□□ 1.36
NKX2-1-201ENST00000354822 DRICH1Q6PGQ1 229 aaPredicted RBP23.58■■□□□ 1.36
NKX2-1-201ENST00000354822 UHMK1Q8TAS1 419 aaKnown RBP23.58■■□□□ 1.36
NKX2-1-201ENST00000354822 O00370 1275 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 SOCS7O14512 581 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 ASAP2O43150 1006 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 TCEA3O75764 348 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 ARIH2O95376 493 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 RPL7AP62424 266 aaKnown RBP23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 DCUN1D2Q6PH85 259 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 USP50Q70EL3 339 aaPredicted RBP23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 RELL1Q8IUW5 271 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 DHX37Q8IY37 1157 aaKnown RBP23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 FAXDC2Q96IV6 333 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 ANKRD36BP1Q96IX9 119 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 SEC16BQ96JE7 1060 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 FZD8Q9H461 694 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 SMARCAD1Q9H4L7 1026 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 PTPRHQ9HD43 1115 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 INTS9Q9NV88 658 aaKnown RBP23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 TCRBV5S1A1TA0A578 114 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 CD58P19256 250 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 LIG3P49916 1009 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 TFAMQ00059 246 aaKnown RBP23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 IFT88Q13099 833 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 ZNF699Q32M78 642 aa23.57■■□□□ 1.36
NKX2-1-201ENST00000354822 RHPN2Q8IUC4 686 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms