RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 LVRNQ6Q4G3 990 aa12.85□□□□□ -0.35
TRPM3-201ENST00000354500 SPATA20Q8TB22 786 aa12.85□□□□□ -0.35
TRPM3-201ENST00000354500 TNFRSF25Q93038 417 aa12.85□□□□□ -0.35
TRPM3-201ENST00000354500 PCMTD2Q9NV79 361 aa12.85□□□□□ -0.35
TRPM3-201ENST00000354500 TRAF3IP3Q9Y228 551 aa12.85□□□□□ -0.35
TRPM3-201ENST00000354500 MRPL42Q9Y6G3 142 aaKnown RBP12.85□□□□□ -0.35
TRPM3-201ENST00000354500 SIGLEC1Q9BZZ2 1709 aa12.85□□□□□ -0.35
TRPM3-201ENST00000354500 LOC100653049A0A140TA62 436 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 EXTL3O43909 919 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 KRT34O76011 436 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 SKIP12755 728 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 ANXA13P27216 316 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 RAP1GAPP47736 663 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 SLC12A3P55017 1021 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 OR6P1Q8NGX9 317 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 MAP3K7O43318 606 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 MYL6P60660 151 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 PDE1CQ14123 709 aaPredicted RBP12.84□□□□□ -0.35
TRPM3-201ENST00000354500 MROH9Q5TGP6 573 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 C4orf32Q8N8J7 132 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 ZNF384Q8TF68 577 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 SLC40A1Q9NP59 571 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 ANKEF1Q9NU02 776 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 GTSE1Q9NYZ3 720 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 ZFATQ9P243 1243 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 CPSF3Q9UKF6 684 aaKnown RBP12.84□□□□□ -0.35
TRPM3-201ENST00000354500 CCT8L1PA6NM43 557 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 NEMP1O14524 444 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 MX2P20592 715 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 PMLP29590 882 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 SOX11P35716 441 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 MARCKSL1P49006 195 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 TNFAIP2Q03169 654 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 MAP3K21Q5TCX8 1036 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 AGBL2Q5U5Z8 902 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 TRAPPC12Q8WVT3 735 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 NIF3L1Q9GZT8 377 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 TMBIM4Q9HC24 238 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 OLFML3Q9NRN5 406 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRPM3-201ENST00000354500 BFARQ9NZS9 450 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 MAP2K7O14733 419 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 ZNF263O14978 683 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 KRT4P19013 534 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 NR1H3Q13133 447 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 ARL13BQ3SXY8 428 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 DACT2Q5SW24 774 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 TRIM67Q6ZTA4 783 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 FASTKD5Q7L8L6 764 aaKnown RBP12.84□□□□□ -0.35
TRPM3-201ENST00000354500 ACTRT1Q8TDG2 376 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 BAP1Q92560 729 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 CLMNQ96JQ2 1002 aa12.84□□□□□ -0.35
TRPM3-201ENST00000354500 DDX56Q9NY93 547 aaKnown RBP12.84□□□□□ -0.35
TRPM3-201ENST00000354500 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.83□□□□□ -0.36
TRPM3-201ENST00000354500 GOLGA8CPA6NN73 597 aa12.83□□□□□ -0.36
TRPM3-201ENST00000354500 Q4G0T1 1027 aa12.83□□□□□ -0.36
TRPM3-201ENST00000354500 KDM7AQ6ZMT4 941 aa12.83□□□□□ -0.36
TRPM3-201ENST00000354500 PRUNE1Q86TP1 453 aa12.83□□□□□ -0.36
TRPM3-201ENST00000354500 LCA5Q86VQ0 697 aa12.83□□□□□ -0.36
TRPM3-201ENST00000354500 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRPM3-201ENST00000354500 ANKRD63C9JTQ0 380 aa12.83□□□□□ -0.36
TRPM3-201ENST00000354500 IGF2BP3O00425 579 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRPM3-201ENST00000354500 LUC7L3O95232 432 aaKnown RBP12.83□□□□□ -0.36
TRPM3-201ENST00000354500 FDX1P10109 184 aa12.83□□□□□ -0.36
TRPM3-201ENST00000354500 TMEM132DQ14C87 1099 aa12.83□□□□□ -0.36
TRPM3-201ENST00000354500 MOXD1Q6UVY6 613 aa12.83□□□□□ -0.36
TRPM3-201ENST00000354500 NT5DC3Q86UY8 548 aa12.83□□□□□ -0.36
TRPM3-201ENST00000354500 SLC26A7Q8TE54 656 aa12.83□□□□□ -0.36
TRPM3-201ENST00000354500 FAM163AQ96GL9 167 aaPredicted RBP12.83□□□□□ -0.36
TRPM3-201ENST00000354500 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.83□□□□□ -0.36
TRPM3-201ENST00000354500 APOL1O14791 398 aa12.83□□□□□ -0.36
TRPM3-201ENST00000354500 NPTXRO95502 500 aa12.83□□□□□ -0.36
TRPM3-201ENST00000354500 BCAS3Q9H6U6 928 aa12.83□□□□□ -0.36
TRPM3-201ENST00000354500 SCOCQ9UIL1 159 aa12.83□□□□□ -0.36
TRPM3-201ENST00000354500 CCL15-CCL14A0A0B4J2E2 113 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 RARAP10276 462 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 CDH8P55286 799 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 CNTN2Q02246 1040 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 ARHGEF6Q15052 776 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 CCL15Q16663 113 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 RGS9BPQ6ZS82 235 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 NOP9Q86U38 636 aaKnown RBP12.82□□□□□ -0.36
TRPM3-201ENST00000354500 RBM46Q8TBY0 533 aaKnown RBP12.82□□□□□ -0.36
TRPM3-201ENST00000354500 LRGUKQ96M69 825 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 FSD1LQ9BXM9 530 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 OSBPL1AQ9BXW6 950 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 PPP1R11O60927 126 aaPredicted RBP12.82□□□□□ -0.36
TRPM3-201ENST00000354500 TARSP26639 723 aaKnown RBP12.82□□□□□ -0.36
TRPM3-201ENST00000354500 RPL21P46778 160 aaKnown RBP12.82□□□□□ -0.36
TRPM3-201ENST00000354500 STX1BP61266 288 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 PTK7Q13308 1070 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 DCAF6Q58WW2 860 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 RABGAP1LQ5R372 815 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 PDZD8Q8NEN9 1154 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 IL31RAQ8NI17 732 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 SLC16A10Q8TF71 515 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 SPON2Q9BUD6 331 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 TSSK1BQ9BXA7 367 aa12.82□□□□□ -0.36
TRPM3-201ENST00000354500 SUDS3Q9H7L9 328 aaPredicted RBP12.82□□□□□ -0.36
TRPM3-201ENST00000354500 ANLNQ9NQW6 1124 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms