RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 STRBPQ96SI9 672 aaKnown RBP10.46□□□□□ -0.74
COL11A1-201ENST00000353414 TUBB6Q9BUF5 446 aa10.46□□□□□ -0.74
COL11A1-201ENST00000353414 RALBP11234 206 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 ALDH9A1P49189 494 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 TDRD10Q5VZ19 366 aaKnown RBP10.45□□□□□ -0.74
COL11A1-201ENST00000353414 SARM1Q6SZW1 724 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 GLB1LQ6UWU2 654 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 VSTM4Q8IW00 320 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 EXOC4Q96A65 974 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 TARSL2A2RTX5 802 aaKnown RBP10.45□□□□□ -0.74
COL11A1-201ENST00000353414 HMGB1P1B2RPK0 211 aaPredicted RBP10.45□□□□□ -0.74
COL11A1-201ENST00000353414 TCP11X1B4DZS4 312 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 ERVV-1B6SEH8 477 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 SCAMP3O14828 347 aaKnown RBP10.45□□□□□ -0.74
COL11A1-201ENST00000353414 TEX33O43247 280 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 HAUS5O94927 633 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 NFICP08651 508 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 HPGDP15428 266 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 PDGFRAP16234 1089 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 TNNI3P19429 210 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 IL10P22301 178 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 CLCN6P51797 869 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 C2CD6Q53TS8 623 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 AMACRQ9UHK6 382 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 CRLS1Q9UJA2 301 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 CASTOR2A6NHX0 329 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 AP3B2Q13367 1082 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 MAPRE1Q15691 268 aaKnown RBP10.45□□□□□ -0.74
COL11A1-201ENST00000353414 DOK6Q6PKX4 331 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 HAUS6Q7Z4H7 955 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 EXO5Q9H790 373 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 ERBB4Q15303 1308 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 MFAP3LO75121 409 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 CPSF4O95639 269 aaKnown RBP10.45□□□□□ -0.74
COL11A1-201ENST00000353414 NCOA4Q13772 614 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 OLFML2BQ68BL8 750 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 C4orf33Q8N1A6 199 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 TRIM62Q9BVG3 475 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 TRIM8Q9BZR9 551 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 TARBP1Q13395 1621 aaKnown RBP10.45□□□□□ -0.74
COL11A1-201ENST00000353414 IQCMA0A1B0GVH7 501 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 TAL1P17542 331 aaPredicted RBP10.45□□□□□ -0.74
COL11A1-201ENST00000353414 SCARA3Q6AZY7 606 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 PPP1R2P3Q6NXS1 205 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 C18orf8Q96DM3 657 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 AHCYL2Q96HN2 611 aaKnown RBP10.45□□□□□ -0.74
COL11A1-201ENST00000353414 PCDHA10Q9Y5I2 948 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 NUDT14O95848 222 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 GH1P01241 217 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 ALOX15P16050 662 aaPredicted RBP10.45□□□□□ -0.74
COL11A1-201ENST00000353414 KLK7P49862 253 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 GMPSP49915 693 aaPredicted RBP10.45□□□□□ -0.74
COL11A1-201ENST00000353414 PPP4R3CPQ6ZMV5 832 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 BTN2A1Q7KYR7 527 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 TTC13Q8NBP0 860 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 SPATA18Q8TC71 538 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 KCTD10Q9H3F6 313 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 KIAA1586Q9HCI6 787 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 CHMP2BQ9UQN3 213 aa10.45□□□□□ -0.74
COL11A1-201ENST00000353414 MOXD2PA6NHM9 499 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 SYNCRIPO60506 623 aaKnown RBP10.44□□□□□ -0.74
COL11A1-201ENST00000353414 ITGB3P05106 788 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 ENO2P09104 434 aaPredicted RBP10.44□□□□□ -0.74
COL11A1-201ENST00000353414 CYP2C9P11712 490 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 FNTAP49354 379 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 RESTQ13127 1097 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 STARD3Q14849 445 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 OSBPL9Q96SU4 736 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 KATNAL1Q9BW62 490 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 DCP1AQ9NPI6 582 aaPredicted RBP10.44□□□□□ -0.74
COL11A1-201ENST00000353414 CPA4Q9UI42 421 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 FZD1Q9UP38 647 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 SPATA31A6Q5VVP1 1343 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 SMNDC1O75940 238 aaKnown RBP eCLIP10.44□□□□□ -0.74
COL11A1-201ENST00000353414 ZNF286BP0CG31 522 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 GPC1P35052 558 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 SERPINB4P48594 390 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 SHROOM1Q2M3G4 852 aaPredicted RBP10.44□□□□□ -0.74
COL11A1-201ENST00000353414 KRT39Q6A163 491 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 GJB7Q6PEY0 223 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 TRAF7Q6Q0C0 670 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 CLIP3Q96DZ5 547 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 WNK4Q96J92 1243 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 LY9Q9HBG7 655 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 DISP1Q96F81 1524 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 TTC37Q6PGP7 1564 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 STRNO43815 780 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 FGFR2P21802 821 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 CDC25BP30305 580 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 RAD23BP54727 409 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 MTFMTQ96DP5 389 aaKnown RBP10.44□□□□□ -0.74
COL11A1-201ENST00000353414 PGLYRP2Q96PD5 576 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 PARK7Q99497 189 aaKnown RBP10.44□□□□□ -0.74
COL11A1-201ENST00000353414 METP08581 1390 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 GRK2P25098 689 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 SFNP31947 248 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 CSNK2BP67870 215 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 APBA1Q02410 837 aa10.44□□□□□ -0.74
COL11A1-201ENST00000353414 TRIP4Q15650 581 aaPredicted RBP10.44□□□□□ -0.74
COL11A1-201ENST00000353414 EXD1Q8NHP7 514 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms