RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 SLC18A1P54219 525 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 RGS9BPQ6ZS82 235 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 NSMCE1Q8WV22 266 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 SLITRK1Q96PX8 696 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 KLHL11Q9NVR0 708 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 NOP53Q9NZM5 478 aaKnown RBP25.96■■□□□ 1.75
CPNE1-202ENST00000352393 STARD13Q9Y3M8 1113 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 PCDHB4Q9Y5E5 795 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 DKC1O60832 514 aaKnown RBP eCLIP25.96■■□□□ 1.75
CPNE1-202ENST00000352393 KCNA2P16389 499 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 SSR1P43307 286 aaKnown RBP25.96■■□□□ 1.75
CPNE1-202ENST00000352393 EAPPQ56P03 285 aaPredicted RBP25.96■■□□□ 1.75
CPNE1-202ENST00000352393 PPP1R2P3Q6NXS1 205 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 TMEM270Q6UE05 265 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 FAM47EQ6ZV65 393 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 VSIG10LQ86VR7 867 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 RBBP8NLQ8NC74 664 aaPredicted RBP25.96■■□□□ 1.75
CPNE1-202ENST00000352393 FEZF2Q8TBJ5 459 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 RBM41Q96IZ5 413 aaKnown RBP25.96■■□□□ 1.75
CPNE1-202ENST00000352393 DNPEPQ9ULA0 475 aa25.96■■□□□ 1.75
CPNE1-202ENST00000352393 CCND2P30279 289 aa25.95■■□□□ 1.74
CPNE1-202ENST00000352393 GBP2P32456 591 aaPredicted RBP25.95■■□□□ 1.74
CPNE1-202ENST00000352393 ABCD1P33897 745 aa25.95■■□□□ 1.74
CPNE1-202ENST00000352393 SEPT9Q9UHD8 586 aaPredicted RBP25.95■■□□□ 1.74
CPNE1-202ENST00000352393 IP6K2Q9UHH9 426 aa25.95■■□□□ 1.74
CPNE1-202ENST00000352393 ZBED4O75132 1171 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 SSTR3P32745 418 aaPredicted RBP25.94■■□□□ 1.74
CPNE1-202ENST00000352393 CETN2P41208 172 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 CLNS1AP54105 237 aaKnown RBP25.94■■□□□ 1.74
CPNE1-202ENST00000352393 RCOR2Q8IZ40 523 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 ALLCQ8N6M5 410 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 FBF1Q8TES7 1133 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 CYP26B1Q9NR63 512 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 PARVAQ9NVD7 372 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 TELO2Q9Y4R8 837 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.94■■□□□ 1.74
CPNE1-202ENST00000352393 PI4K2BG5E9Z4 385 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 SPAG7O75391 227 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 RPSAP08865 295 aaKnown RBP25.94■■□□□ 1.74
CPNE1-202ENST00000352393 KRT10P13645 584 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 TCF4P15884 667 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 PRKCEQ02156 737 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 ATP13A4Q4VNC1 1196 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 RSRC1Q96IZ7 334 aaKnown RBP25.94■■□□□ 1.74
CPNE1-202ENST00000352393 TRABDQ9H4I3 376 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 AGO2Q9UKV8 859 aaKnown RBP25.94■■□□□ 1.74
CPNE1-202ENST00000352393 STK38LQ9Y2H1 464 aa25.94■■□□□ 1.74
CPNE1-202ENST00000352393 PSAPP07602 524 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 PECAM1P16284 738 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-202ENST00000352393 ACOT2P49753 483 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 POLGP54098 1239 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-202ENST00000352393 MOGSQ13724 837 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 FASTKD3Q14CZ7 662 aaKnown RBP25.93■■□□□ 1.74
CPNE1-202ENST00000352393 SWSAP1Q6NVH7 229 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 ZBED3Q96IU2 234 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-202ENST00000352393 HAPLN2Q9GZV7 340 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 TXLNGQ9NUQ3 528 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 DONSONQ9NYP3 566 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 ZNF541Q9H0D2 1346 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 KRT1P04264 644 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 ZSCAN5DPP0CG00 497 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 LACTBP83111 547 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-202ENST00000352393 MCL1Q07820 350 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 ZNF252P-AS1Q0IIN9 211 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 SPARCL1Q14515 664 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 MFSD7Q6UXD7 560 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 CCDC60Q8IWA6 550 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-202ENST00000352393 KCNN1Q92952 543 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 MIEF2Q96C03 454 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 MYLK2Q9H1R3 596 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 SENP1Q9P0U3 644 aa25.93■■□□□ 1.74
CPNE1-202ENST00000352393 SMG5Q9UPR3 1016 aaKnown RBP25.93■■□□□ 1.74
CPNE1-202ENST00000352393 HGSO14964 777 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-202ENST00000352393 MAFGO15525 162 aa25.92■■□□□ 1.74
CPNE1-202ENST00000352393 WFS1O76024 890 aa25.92■■□□□ 1.74
CPNE1-202ENST00000352393 NR3C2P08235 984 aa25.92■■□□□ 1.74
CPNE1-202ENST00000352393 MMP8P22894 467 aa25.92■■□□□ 1.74
CPNE1-202ENST00000352393 TBXAS1P24557 533 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-202ENST00000352393 ARSEP51690 589 aa25.92■■□□□ 1.74
CPNE1-202ENST00000352393 YARSP54577 528 aaKnown RBP25.92■■□□□ 1.74
CPNE1-202ENST00000352393 SLC8A3P57103 927 aa25.92■■□□□ 1.74
CPNE1-202ENST00000352393 RPL7AP62424 266 aaKnown RBP25.92■■□□□ 1.74
CPNE1-202ENST00000352393 BAATQ14032 418 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-202ENST00000352393 CRYMQ14894 314 aa25.92■■□□□ 1.74
CPNE1-202ENST00000352393 PKN2Q16513 984 aaKnown RBP25.92■■□□□ 1.74
CPNE1-202ENST00000352393 KAZNQ674X7 775 aa25.92■■□□□ 1.74
CPNE1-202ENST00000352393 MAB21L3Q8N8X9 362 aa25.92■■□□□ 1.74
CPNE1-202ENST00000352393 PAIP2Q9BPZ3 127 aaKnown RBP25.92■■□□□ 1.74
CPNE1-202ENST00000352393 ZNF148Q9UQR1 794 aa25.92■■□□□ 1.74
CPNE1-202ENST00000352393 COL11A1P12107 1806 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-202ENST00000352393 MYH9P35579 1960 aaKnown RBP25.92■■□□□ 1.74
CPNE1-202ENST00000352393 TMEM191CA6NGB0 347 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 TJP3O95049 919 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 TMEM191BP0C7N4 346 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 PTPN7P35236 360 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 DNAJC3Q13217 504 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 MORF4L2Q15014 288 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 LRRC38Q5VT99 294 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 SPOCK2Q92563 424 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 UTP4Q969X6 686 aaKnown RBP25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms