RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 TAF6P49848 677 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 ZNF75DP51815 510 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 UBASH3AP57075 661 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 EXOC3L4Q17RC7 722 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 WDR72Q3MJ13 1102 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 WSCD1Q658N2 575 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 E4F1Q66K89 784 aaPredicted RBP13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 IQCEQ6IPM2 695 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 FUT10Q6P4F1 479 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 GBP6Q6ZN66 633 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 RRAGAQ7L523 313 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 USP37Q86T82 979 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 GPIHBP1Q8IV16 184 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 SPPL3Q8TCT6 385 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 WHAMMQ8TF30 809 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 FAM193BQ96PV7 902 aaPredicted RBP13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 NIF3L1Q9GZT8 377 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 FAM207AQ9NSI2 230 aaPredicted RBP13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 NXF1Q9UBU9 619 aaKnown RBP13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 SNX9Q9Y5X1 595 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 TRIOO75962 3097 aa13.66□□□□□ -0.22
ERGIC3-202ENST00000348547 ATICP31939 592 aa13.66□□□□□ -0.22
ERGIC3-202ENST00000348547 ALDH7A1P49419 539 aaKnown RBP13.66□□□□□ -0.22
ERGIC3-202ENST00000348547 ERVFC1P60507 584 aa13.66□□□□□ -0.22
ERGIC3-202ENST00000348547 ORC1Q13415 861 aa13.66□□□□□ -0.22
ERGIC3-202ENST00000348547 TRPC3Q13507 836 aa13.66□□□□□ -0.22
ERGIC3-202ENST00000348547 RAB30Q15771 203 aa13.66□□□□□ -0.22
ERGIC3-202ENST00000348547 SGSM1Q2NKQ1 1148 aa13.66□□□□□ -0.22
ERGIC3-202ENST00000348547 SPOUT1Q5T280 376 aaKnown RBP13.66□□□□□ -0.22
ERGIC3-202ENST00000348547 KLHDC7AQ5VTJ3 777 aa13.66□□□□□ -0.22
ERGIC3-202ENST00000348547 PPP2R2DQ66LE6 453 aa13.66□□□□□ -0.22
ERGIC3-202ENST00000348547 TIFAQ96CG3 184 aa13.66□□□□□ -0.22
ERGIC3-202ENST00000348547 TGS1Q96RS0 853 aaKnown RBP13.66□□□□□ -0.22
ERGIC3-202ENST00000348547 GRPEL1Q9HAV7 217 aa13.66□□□□□ -0.22
ERGIC3-202ENST00000348547 CHST7Q9NS84 486 aa13.66□□□□□ -0.22
ERGIC3-202ENST00000348547 CYB561D2O14569 222 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 TBC1D4O60343 1298 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 LILRB3O75022 631 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 CYP11A1P05108 521 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 LMO2P25791 158 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 IRS1P35568 1242 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 PNPLA4P41247 253 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 CDR1P51861 262 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 TPM4P67936 248 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 PLCB3Q01970 1234 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 CUL2Q13617 745 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 MRPL58Q14197 206 aaKnown RBP13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 UVSSAQ2YD98 709 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 SV2CQ496J9 727 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 FAM171A1Q5VUB5 890 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 PRSS55Q6UWB4 352 aaPredicted RBP13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 DDX53Q86TM3 631 aaKnown RBP13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 VSTM4Q8IW00 320 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 OR10T2Q8NGX3 314 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 OLIG1Q8TAK6 271 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 GDPD5Q8WTR4 605 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 ARNTL2Q8WYA1 636 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 BAP1Q92560 729 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 TAF4BQ92750 862 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 ZNF560Q96MR9 790 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 TMEM209Q96SK2 561 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 ZSWIM1Q9BR11 485 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 HERC2P3Q9BVR0 1158 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 COLEC11Q9BWP8 271 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 ZBP1Q9H171 429 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 DPEP3Q9H4B8 488 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 ACP6Q9NPH0 428 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 PLCB1Q9NQ66 1216 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 APEX2Q9UBZ4 518 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 PCDHB8Q9UN66 801 aa13.65□□□□□ -0.22
ERGIC3-202ENST00000348547 PATJQ8NI35 1801 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 SF3B1O75533 1304 aaKnown RBP eCLIP13.64□□□□□ -0.237e-7■■■■■ 79
ERGIC3-202ENST00000348547 A0A1W2PQC6 194 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 GABRDO14764 452 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 ATP2C2O75185 946 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 TADA2AO75478 443 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 VNN2O95498 520 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 GYPCP04921 128 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 UCHL3P15374 230 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 ZNF132P52740 706 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 JAM2P57087 298 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 GOLGA8FQ08AF8 430 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 GOLGA8DPQ0D2H9 430 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 INCA1Q0VD86 236 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 TBX2Q13207 712 aaPredicted RBP13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 ZNF667Q5HYK9 610 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 VARS2Q5ST30 1063 aaKnown RBP13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 ANKRD20A12PQ8NF67 263 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 NT5C1BQ96P26 610 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 PKMYT1Q99640 499 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 ELOVL4Q9GZR5 314 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 MSRAQ9UJ68 235 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 PCDHB12Q9Y5F1 795 aa13.64□□□□□ -0.23
ERGIC3-202ENST00000348547 HIDE1A8MVS5 230 aa13.63□□□□□ -0.23
ERGIC3-202ENST00000348547 H3BNC9 293 aa13.63□□□□□ -0.23
ERGIC3-202ENST00000348547 FSCN2O14926 492 aa13.63□□□□□ -0.23
ERGIC3-202ENST00000348547 CSPG5O95196 566 aa13.63□□□□□ -0.23
ERGIC3-202ENST00000348547 SOD2P04179 222 aa13.63□□□□□ -0.23
ERGIC3-202ENST00000348547 RPL17P18621 184 aaKnown RBP13.63□□□□□ -0.23
ERGIC3-202ENST00000348547 CD58P19256 250 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms