RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 MED21Q13503 144 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 R3HDM1Q15032 1099 aaKnown RBP16.19■□□□□ 0.18
LMNA-201ENST00000347559 SLC51AQ86UW1 340 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 ZCCHC9Q8N567 271 aaKnown RBP16.19■□□□□ 0.18
LMNA-201ENST00000347559 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.19■□□□□ 0.181e-21■■■□□ 14.8
LMNA-201ENST00000347559 LMO3Q8TAP4 145 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 PANX3Q96QZ0 392 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 FHDC1Q9C0D6 1143 aaPredicted RBP16.19■□□□□ 0.18
LMNA-201ENST00000347559 KLHL11Q9NVR0 708 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 USTQ9Y2C2 406 aa16.19■□□□□ 0.18
LMNA-201ENST00000347559 FAM237BA0A1B0GVD1 139 aa16.18■□□□□ 0.18
LMNA-201ENST00000347559 EEF2P13639 858 aaKnown RBP16.18■□□□□ 0.18
LMNA-201ENST00000347559 RBM15BQ8NDT2 890 aaKnown RBP16.18■□□□□ 0.18
LMNA-201ENST00000347559 ZNF398Q8TD17 642 aa16.18■□□□□ 0.18
LMNA-201ENST00000347559 PSMC3IPQ9P2W1 217 aaPredicted RBP16.18■□□□□ 0.18
LMNA-201ENST00000347559 PPARGC1AQ9UBK2 798 aaKnown RBP16.18■□□□□ 0.18
LMNA-201ENST00000347559 GTF3C4Q9UKN8 822 aa16.18■□□□□ 0.18
LMNA-201ENST00000347559 ZNF148Q9UQR1 794 aa16.18■□□□□ 0.18
LMNA-201ENST00000347559 PIK3CDO00329 1044 aa16.18■□□□□ 0.18
LMNA-201ENST00000347559 HNRNPCP07910 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
LMNA-201ENST00000347559 CD58P19256 250 aa16.18■□□□□ 0.18
LMNA-201ENST00000347559 PPP3CAQ08209 521 aa16.18■□□□□ 0.18
LMNA-201ENST00000347559 SPIRE1Q08AE8 756 aa16.18■□□□□ 0.18
LMNA-201ENST00000347559 LPCAT4Q643R3 524 aa16.18■□□□□ 0.18
LMNA-201ENST00000347559 INTS5Q6P9B9 1019 aaKnown RBP16.18■□□□□ 0.18
LMNA-201ENST00000347559 STKLD1Q8NE28 680 aa16.18■□□□□ 0.18
LMNA-201ENST00000347559 HIPK4Q8NE63 616 aa16.18■□□□□ 0.18
LMNA-201ENST00000347559 PYDC1Q8WXC3 89 aa16.18■□□□□ 0.18
LMNA-201ENST00000347559 MTBPQ96DY7 904 aa16.18■□□□□ 0.18
LMNA-201ENST00000347559 OXNAD1Q96HP4 312 aaPredicted RBP16.18■□□□□ 0.18
LMNA-201ENST00000347559 GPR101Q96P66 508 aaPredicted RBP16.18■□□□□ 0.18
LMNA-201ENST00000347559 STK32BQ9NY57 414 aa16.18■□□□□ 0.18
LMNA-201ENST00000347559 PCDHGA4Q9Y5G9 962 aa16.18■□□□□ 0.18
LMNA-201ENST00000347559 CYP1A2P05177 515 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 ABHD2P08910 425 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 FMO1Q01740 532 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 RASA3Q14644 834 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 ODR4Q5SWX8 454 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 DPP8Q6V1X1 898 aaPredicted RBP16.17■□□□□ 0.18
LMNA-201ENST00000347559 SKA1Q96BD8 255 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 IWS1Q96ST2 819 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 IL1RAPL1Q9NZN1 696 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 HSFX1Q9UBD0 423 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 MTO1Q9Y2Z2 717 aaKnown RBP16.17■□□□□ 0.18
LMNA-201ENST00000347559 PCDHA1Q9Y5I3 950 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 NHSL1Q5SYE7 1610 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 MTA2O94776 668 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 BGNP21810 368 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 SNAP25P60880 206 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 ARHGAP4P98171 946 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 GPS1Q13098 491 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 SH2D4BQ5SQS7 431 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 DPY19L2Q6NUT2 758 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 SMC1BQ8NDV3 1235 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 PHACTR1Q9C0D0 580 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 TMEM117Q9H0C3 514 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 PARVGQ9HBI0 331 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 MTMR4Q9NYA4 1195 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 UVRAGQ9P2Y5 699 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 NOCTQ9UK39 431 aaKnown RBP16.17■□□□□ 0.18
LMNA-201ENST00000347559 ARHGAP42A6NI28 874 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 IFNB1P01574 187 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 PABPC4LP0CB38 370 aaKnown RBP16.17■□□□□ 0.18
LMNA-201ENST00000347559 PICALMQ13492 652 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 TRIM42Q8IWZ5 723 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 OR6Y1Q8NGX8 325 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 CYP2W1Q8TAV3 490 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 SHKBP1Q8TBC3 707 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 HAUS1Q96CS2 278 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 EIF2AK1Q9BQI3 630 aaKnown RBP16.17■□□□□ 0.18
LMNA-201ENST00000347559 SMYD3Q9H7B4 428 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 KCNK13Q9HB14 408 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 OLFML3Q9NRN5 406 aa16.17■□□□□ 0.18
LMNA-201ENST00000347559 ZNF862O60290 1169 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 TMCC1O94876 653 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 GZMAP12544 262 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 AKR1B1P15121 316 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 CRABP2P29373 138 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 SSTR1P30872 391 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 TBC1D10BQ4KMP7 808 aaPredicted RBP16.16■□□□□ 0.18
LMNA-201ENST00000347559 ULK2Q8IYT8 1036 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 CLMNQ96JQ2 1002 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 RANBP17Q9H2T7 1088 aaKnown RBP16.16■□□□□ 0.18
LMNA-201ENST00000347559 SUDS3Q9H7L9 328 aaPredicted RBP16.16■□□□□ 0.18
LMNA-201ENST00000347559 SLC7A8Q9UHI5 535 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 PI4K2BG5E9Z4 385 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 EML1O00423 815 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 ZBTB5O15062 677 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 KITP10721 976 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 GAP43P17677 238 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 ARSEP51690 589 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 ZNF543Q08ER8 600 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 SFT2D3Q587I9 215 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 TREML1Q86YW5 311 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 CEP70Q8NHQ1 597 aa16.16■□□□□ 0.18
LMNA-201ENST00000347559 TFDP1Q14186 410 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 TMPRSS6Q8IU80 811 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 GSTCDQ8NEC7 633 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 ETNPPLQ8TBG4 499 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 JDP2Q8WYK2 163 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms