RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 MICALL2Q8IY33 904 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 ING2Q9H160 280 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 ASNSD1Q9NWL6 643 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 IL1R1P14778 569 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 HERVK_113P62684 666 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 GALNT4Q8N4A0 578 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 FAF2Q96CS3 445 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 CFAP36Q96G28 342 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 OTUD5Q96G74 571 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 PRMT6Q96LA8 375 aaPredicted RBP16.26■□□□□ 0.19
SRPK1-201ENST00000346162 SCAF8Q9UPN6 1271 aaKnown RBP16.26■□□□□ 0.19
SRPK1-201ENST00000346162 MYO5BQ9ULV0 1848 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 ARHGEF9O43307 516 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 DEAF1O75398 565 aaPredicted RBP16.25■□□□□ 0.19
SRPK1-201ENST00000346162 FESP07332 822 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 NPEPPSP55786 919 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 SLC34A1Q06495 639 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 P3H1Q32P28 736 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 JADE1Q6IE81 842 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 TMEM143Q96AN5 459 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 SNF8Q96H20 258 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 RUSC1Q9BVN2 902 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 UNC45AQ9H3U1 944 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 CNOT7Q9UIV1 285 aaKnown RBP16.25■□□□□ 0.19
SRPK1-201ENST00000346162 DPPA5A6NC42 116 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 SRRM3A6NNA2 597 aaPredicted RBP16.25■□□□□ 0.19
SRPK1-201ENST00000346162 GOLGA8MH3BSY2 632 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 UPP2O95045 317 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 KRT7P08729 469 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 TMEM253P0C7T8 217 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 ATP6V1C1P21283 382 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 ZNF844Q08AG5 666 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 TTLL4Q14679 1199 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 RAPH1Q70E73 1250 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 RNF149Q8NC42 400 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 TOPORSQ9NS56 1045 aaPredicted RBP16.25■□□□□ 0.19
SRPK1-201ENST00000346162 FAM53CQ9NYF3 392 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 NAGPAQ9UK23 515 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 SMIM22K7EJ46 135 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 SSTR3P32745 418 aaPredicted RBP16.25■□□□□ 0.19
SRPK1-201ENST00000346162 EFNA5P52803 228 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 GJB7Q6PEY0 223 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 PCGF5Q86SE9 256 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 JAMLQ86YT9 394 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 DDI1Q8WTU0 396 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 TSSK1BQ9BXA7 367 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 AGPAT3Q9NRZ7 376 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 KIAA0391O15091 583 aaKnown RBP16.25■□□□□ 0.19
SRPK1-201ENST00000346162 LSM1O15116 133 aaKnown RBP16.25■□□□□ 0.19
SRPK1-201ENST00000346162 SHOX2O60902 331 aaPredicted RBP16.25■□□□□ 0.19
SRPK1-201ENST00000346162 SEC24DO94855 1032 aaPredicted RBP16.25■□□□□ 0.19
SRPK1-201ENST00000346162 ALDH18A1P54886 795 aaKnown RBP16.25■□□□□ 0.19
SRPK1-201ENST00000346162 GPS1Q13098 491 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 EPS8L3Q8TE67 593 aaKnown RBP16.25■□□□□ 0.19
SRPK1-201ENST00000346162 C9orf72Q96LT7 481 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 SMYD2Q9NRG4 433 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 HEY1Q9Y5J3 304 aa16.25■□□□□ 0.19
SRPK1-201ENST00000346162 A0A0U1RQJ8 604 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 NFX1Q12986 1120 aaKnown RBP16.24■□□□□ 0.19
SRPK1-201ENST00000346162 PATL1Q86TB9 770 aaKnown RBP16.24■□□□□ 0.19
SRPK1-201ENST00000346162 METTL23Q86XA0 190 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 ZNF280CQ8ND82 737 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 SPATA33Q96N06 139 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 KLC2Q9H0B6 622 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 DNAJC5Q9H3Z4 198 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 CCDC134Q9H6E4 229 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 MAGED2Q9UNF1 606 aaPredicted RBP16.24■□□□□ 0.19
SRPK1-201ENST00000346162 LPXNO60711 386 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 SREBF1P36956 1147 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 AP3M2P53677 418 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 LRRC74BQ6ZQY2 392 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 NLRP9Q7RTR0 991 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 TMEM237Q96Q45 408 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 PARVAQ9NVD7 372 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 PHTF1Q9UMS5 762 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 AFG3L2Q9Y4W6 797 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 PTPN4P29074 926 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 CIITAP33076 1130 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 KRT17Q04695 432 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 TEDDM1Q5T9Z0 273 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 IYDQ6PHW0 289 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 TRIM67Q6ZTA4 783 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 TMCO5AQ8N6Q1 288 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 CAAP1Q9H8G2 361 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 ALG6Q9Y672 507 aa16.24■□□□□ 0.19
SRPK1-201ENST00000346162 FAM237AA0A1B0GTK4 181 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 M0QYV0 167 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 YY1P25490 414 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 SCNN1BP51168 640 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 ITGB3BPQ13352 177 aaPredicted RBP16.23■□□□□ 0.19
SRPK1-201ENST00000346162 RNF220Q5VTB9 566 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 CYP39A1Q9NYL5 469 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 DDTLA6NHG4 134 aaPredicted RBP16.23■□□□□ 0.19
SRPK1-201ENST00000346162 EPHB2P29323 1055 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 SLC1A1P43005 524 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 PTDSS1P48651 473 aaKnown RBP16.23■□□□□ 0.19
SRPK1-201ENST00000346162 RAP1GDS1P52306 607 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 RPS6P62753 249 aaKnown RBP16.23■□□□□ 0.19
SRPK1-201ENST00000346162 CDK17Q00537 523 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 IZUMO3Q5VZ72 239 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms