RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PRSS36Q5K4E3 855 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 SLFN12LQ6IEE8 588 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 SLC39A4Q6P5W5 647 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 MAP4K3Q8IVH8 894 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 HSCBQ8IWL3 235 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 SYCP3Q8IZU3 236 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 PDILTQ8N807 584 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 ZBTB44Q8NCP5 570 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 NOC3LQ8WTT2 800 aaKnown RBP13.46□□□□□ -0.25
SGCA-202ENST00000344627 NELL1Q92832 810 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 SMARCD2Q92925 531 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 MCRS1Q96EZ8 462 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 HINFPQ9BQA5 517 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 KXD1Q9BQD3 176 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 TFIP11Q9UBB9 837 aaKnown RBP13.46□□□□□ -0.25
SGCA-202ENST00000344627 ZMYM5Q9UJ78 669 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 ASB3Q9Y575 518 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 INSL5Q9Y5Q6 135 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 GTF3C3Q9Y5Q9 886 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 R4GN57 208 aa13.46□□□□□ -0.25
SGCA-202ENST00000344627 OR6C75A6NL08 312 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 PRR5-ARHGAP8B1AHC4 643 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 M0QZQ0 153 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 GCNT3O95395 438 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 GAP43P17677 238 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 PSMC3P17980 439 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 ARHGAP8P85298 464 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 SLC39A14Q15043 492 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 ZBTB6Q15916 424 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 FOXD4L6Q3SYB3 417 aaPredicted RBP13.45□□□□□ -0.26
SGCA-202ENST00000344627 FOXD4L3Q6VB84 417 aaPredicted RBP13.45□□□□□ -0.26
SGCA-202ENST00000344627 TPRG1Q6ZUI0 275 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 ZNF720Q7Z2F6 126 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 MAML2Q8IZL2 1156 aaPredicted RBP13.45□□□□□ -0.26
SGCA-202ENST00000344627 SUMF1Q8NBK3 374 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 ZNF396Q96N95 335 aaPredicted RBP13.45□□□□□ -0.26
SGCA-202ENST00000344627 ASB16Q96NS5 453 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 PGLYRP2Q96PD5 576 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 ACCSQ96QU6 501 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 FIZ1Q96SL8 496 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 EPC1Q9H2F5 836 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 IKZF4Q9H2S9 585 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 BRD9Q9H8M2 597 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 ASAH2Q9NR71 780 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 SEL1LQ9UBV2 794 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 CPSF3Q9UKF6 684 aaKnown RBP13.45□□□□□ -0.26
SGCA-202ENST00000344627 EXOC7Q9UPT5 735 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 FAM186AA6NE01 2351 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 TCHHQ07283 1943 aa13.45□□□□□ -0.26
SGCA-202ENST00000344627 RIF1Q5UIP0 2472 aaKnown RBP13.44□□□□□ -0.26
SGCA-202ENST00000344627 PPEF2O14830 753 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 FAM189A1O60320 539 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 FOXD2O60548 495 aaPredicted RBP13.44□□□□□ -0.26
SGCA-202ENST00000344627 LILRB5O75023 590 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 NFICP08651 508 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 OR4Q2P0C623 313 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 TYMPP19971 482 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 AARSP49588 968 aaKnown RBP eCLIP13.44□□□□□ -0.26
SGCA-202ENST00000344627 TWF1Q12792 350 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 SMARCB1Q12824 385 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 MYBPC2Q14324 1141 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 POSTNQ15063 836 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 SPATA1Q5VX52 437 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 OVOS1Q6IE37 1185 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 RNF19BQ6ZMZ0 732 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 DGLUCYQ7Z3D6 616 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 MFSD6LQ8IWD5 586 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 SENP8Q96LD8 212 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 PRMT8Q9NR22 394 aaPredicted RBP13.44□□□□□ -0.26
SGCA-202ENST00000344627 PANK4Q9NVE7 773 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 DLL3Q9NYJ7 618 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 PCDHB13Q9Y5F0 798 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 VPS13AQ96RL7 3174 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 SCN1AP35498 2009 aa13.44□□□□□ -0.26
SGCA-202ENST00000344627 ZNF263O14978 683 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 SPTLC2O15270 562 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 ADRB2P07550 413 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 ODC1P11926 461 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 MYL4P12829 197 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 CEBPBP17676 345 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 TARSP26639 723 aaKnown RBP13.43□□□□□ -0.26
SGCA-202ENST00000344627 WEE1P30291 646 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 CNR2P34972 360 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 ALDH1A3P47895 512 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 CCR3P51677 355 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 EPHB3P54753 998 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 LILRA4P59901 499 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 CSTF1Q05048 431 aaKnown RBP13.43□□□□□ -0.26
SGCA-202ENST00000344627 SLC5A9Q2M3M2 681 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 C9orf57Q5W0N0 161 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 TANGO2Q6ICL3 276 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 ARMCX5Q6P1M9 558 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 METTL23Q86XA0 190 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 CCDC65Q8IXS2 484 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 HS6ST3Q8IZP7 471 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 CELF5Q8N6W0 485 aaKnown RBP13.43□□□□□ -0.26
SGCA-202ENST00000344627 SPRYD3Q8NCJ5 442 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 HVCN1Q96D96 273 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 DNAJC19Q96DA6 116 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 TCEAL4Q96EI5 215 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms