RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ASCL5Q7RTU5 278 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 MCPH1Q8NEM0 835 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 OLIG1Q8TAK6 271 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 FAM174AQ8TBP5 190 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 ZFAND2BQ8WV99 257 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 COPS5Q92905 334 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 EPAS1Q99814 870 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 CCDC113Q9H0I3 377 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 AGO3Q9H9G7 860 aaKnown RBP7.89□□□□□ -1.15
ZNF540-202ENST00000343599 TBX20Q9UMR3 447 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 GOLGA6CA6NDK9 693 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 GOLGA6BA6NDN3 693 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 TRAPPC3O43617 180 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 OPA1O60313 960 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 PPFIA3O75145 1194 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 IGLV3-19P01714 112 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 C1SP09871 688 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 GOLGA6DP0CG33 693 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 ZBED6P86452 979 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 IKQ13123 557 aaPredicted RBP7.89□□□□□ -1.15
ZNF540-202ENST00000343599 ECM1Q16610 540 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 THEMIS2Q5TEJ8 643 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 NOTUMQ6P988 496 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 ARHGAP22Q7Z5H3 698 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 FANCBQ8NB91 859 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 ETNPPLQ8TBG4 499 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 TMEM169Q96HH4 297 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 ALS2CR12Q96Q35 445 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 PNKPQ96T60 521 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 TCF25Q9BQ70 676 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 FZD8Q9H461 694 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 POMKQ9H5K3 350 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 GOLGA6AQ9NYA3 693 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 GGA2Q9UJY4 613 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 MTMR6Q9Y217 621 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 HCFC2Q9Y5Z7 792 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 EML5Q05BV3 1969 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 DENND3A2RUS2 1198 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 VWA3AA6NCI4 1184 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 FAM205CA6NFA0 338 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 LRRIQ3A6PVS8 624 aaPredicted RBP7.89□□□□□ -1.15
ZNF540-202ENST00000343599 E7EWF7 191 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 TRDMT1O14717 391 aaKnown RBP7.89□□□□□ -1.15
ZNF540-202ENST00000343599 YKT6O15498 198 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 DFNA5O60443 496 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 KIAA0754O94854 1291 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 GLUD1P00367 558 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 URODP06132 367 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 CDC25AP30304 524 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 GBP2P32456 591 aaPredicted RBP7.89□□□□□ -1.15
ZNF540-202ENST00000343599 CTDSPL2Q05D32 466 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 LONRF3Q496Y0 759 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 LMBRD2Q68DH5 695 aaPredicted RBP7.89□□□□□ -1.15
ZNF540-202ENST00000343599 ZNF852Q6ZMS4 543 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 ADGRD2Q7Z7M1 963 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 TRIM42Q8IWZ5 723 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 SLC44A3Q8N4M1 653 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 GAB3Q8WWW8 586 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 NTPCRQ9BSD7 190 aaKnown RBP7.89□□□□□ -1.15
ZNF540-202ENST00000343599 NAT10Q9H0A0 1025 aaKnown RBP7.89□□□□□ -1.15
ZNF540-202ENST00000343599 SLC40A1Q9NP59 571 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 DISC1Q9NRI5 854 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 FAM105AQ9NUU6 356 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 TJP2Q9UDY2 1190 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 M0QZQ0 153 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 DGAT1O75907 488 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 P4HBP07237 508 aaKnown RBP7.88□□□□□ -1.15
ZNF540-202ENST00000343599 CHMP4BP1P59074 171 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 NAB2Q15742 525 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 BZW1Q7L1Q6 419 aaKnown RBP7.88□□□□□ -1.15
ZNF540-202ENST00000343599 LIMS2Q7Z4I7 341 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 PRR7Q8TB68 274 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 DDX12PQ92771 950 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 OTUB2Q96DC9 234 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 MARCH5Q9NX47 278 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 GOLGA6L9A6NEM1 432 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 SOWAHDA6NJG2 315 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 A6NNZ2 444 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 ZSCAN12O43309 604 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 PHACTR2O75167 634 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 ZNF286BP0CG31 522 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 FERP16591 822 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 PROZP22891 400 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 ALDH7A1P49419 539 aaKnown RBP7.88□□□□□ -1.15
ZNF540-202ENST00000343599 PAPOLAP51003 745 aaKnown RBP7.88□□□□□ -1.15
ZNF540-202ENST00000343599 TBX4P57082 545 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 TUSC3Q13454 348 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 PDGFRLQ15198 375 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 STX1AQ16623 288 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 ZNF423Q2M1K9 1284 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 TUBB8Q3ZCM7 444 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 DBX2Q6ZNG2 339 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 C11orf57Q6ZUT1 292 aaPredicted RBP7.88□□□□□ -1.15
ZNF540-202ENST00000343599 CABP7Q86V35 215 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 RASSF3Q86WH2 238 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 KIRREL3Q8IZU9 778 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 IGSF22Q8N9C0 903 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 BCAS4Q8TDM0 211 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 SPIRE2Q8WWL2 714 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 IRF7Q92985 503 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms