RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 MYO3BQ8WXR4 1341 aa5.02□□□□□ -1.61
CSMD3-203ENST00000343508 TBC1D10BQ4KMP7 808 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-203ENST00000343508 VPS39Q96JC1 886 aa5.02□□□□□ -1.61
CSMD3-203ENST00000343508 SOX13Q9UN79 622 aa5.02□□□□□ -1.61
CSMD3-203ENST00000343508 RFC5P40937 340 aa5.02□□□□□ -1.61
CSMD3-203ENST00000343508 NEK2P51955 445 aa5.02□□□□□ -1.61
CSMD3-203ENST00000343508 MARSP56192 900 aaKnown RBP5.02□□□□□ -1.61
CSMD3-203ENST00000343508 Q4G0T1 1027 aa5.02□□□□□ -1.61
CSMD3-203ENST00000343508 SLC45A4Q5BKX6 768 aa5.02□□□□□ -1.61
CSMD3-203ENST00000343508 TRIM67Q6ZTA4 783 aa5.02□□□□□ -1.61
CSMD3-203ENST00000343508 SIX6OS1Q8N1H7 587 aa5.02□□□□□ -1.61
CSMD3-203ENST00000343508 HES6Q96HZ4 224 aa5.02□□□□□ -1.61
CSMD3-203ENST00000343508 MTRQ99707 1265 aa5.02□□□□□ -1.61
CSMD3-203ENST00000343508 PAK5Q9P286 719 aa5.02□□□□□ -1.61
CSMD3-203ENST00000343508 MYH7BA7E2Y1 1941 aa5.02□□□□□ -1.61
CSMD3-203ENST00000343508 RGPD2P0DJD1 1756 aa5.02□□□□□ -1.61
CSMD3-203ENST00000343508 SLC16A4O15374 487 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 IFI35P80217 286 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 ACVR2BQ13705 512 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 DUOXA2Q1HG44 320 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 HEXIM2Q96MH2 286 aaKnown RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 RAB6BQ9NRW1 208 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 GID8Q9NWU2 228 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 NXF1Q9UBU9 619 aaKnown RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 TMEM94Q12767 1356 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 C16orf96A6NNT2 1141 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 MAFGO15525 162 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 AKAP10O43572 662 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 DEAF1O75398 565 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 APOA4P06727 396 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 CYP11B2P19099 503 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 NMT1P30419 496 aaKnown RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 PTDSS1P48651 473 aaKnown RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 NUP107P57740 925 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 GABPAQ06546 454 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 ZNF394Q53GI3 561 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 DDHD1Q8NEL9 900 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 CATSPER2Q96P56 530 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 C17orf75Q9HAS0 396 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 CD209Q9NNX6 404 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 STX18Q9P2W9 335 aaKnown RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 BLOC1S6Q9UL45 172 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 PXDNQ92626 1479 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 TOPAZ1Q8N9V7 1692 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 POLBP06746 335 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 CACNA2D1P54289 1103 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 ZNF543Q08ER8 600 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 PPP6R3Q5H9R7 873 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 ZNF667Q5HYK9 610 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 FRA10AC1Q70Z53 315 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 ARMCX2Q7L311 632 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 NET1Q7Z628 596 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 RASGEF1CQ8N431 466 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 JMJD4Q9H9V9 463 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 SCN11AQ9UI33 1791 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 F5H6K3 240 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 APOL1O14791 398 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 GTF2H1P32780 548 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 BCAR1P56945 870 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 KLRC3Q07444 240 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 INPP5AQ14642 412 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 CC2D2BQ6DHV5 1058 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 ARID3BQ8IVW6 561 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 B4GALNT2Q8NHY0 566 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 FAM81AQ8TBF8 368 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 C2CD2Q9Y426 696 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 ZC3H11AO75152 810 aaKnown RBP eCLIP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 KRT75O95678 551 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 PAEPP09466 180 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 FGFR2P21802 821 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 CASP2P42575 452 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 INPP1P49441 399 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 PEX5P50542 639 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 PSMC5P62195 406 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 CYTH1Q15438 398 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 QRICH1Q2TAL8 776 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 RNF169Q8NCN4 708 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 RIN3Q8TB24 985 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 FEZF2Q8TBJ5 459 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 ZNF75CPQ92670 426 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 AGPAT3Q9NRZ7 376 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 HSPA2P54652 639 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 TTLL12Q14166 644 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 WLSQ5T9L3 541 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 PCNX4Q63HM2 1172 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 LRRC8BQ6P9F7 803 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 B3GNT6Q6ZMB0 384 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 CCDC24Q8N4L8 307 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 PCYOX1LQ8NBM8 494 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 MCEEQ96PE7 176 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 TMEM120AQ9BXJ8 343 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 ALG13Q9NP73 1137 aaKnown RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 KLHL8Q9P2G9 620 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 HERC5Q9UII4 1024 aaKnown RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 BAZ2BQ9UIF8 2168 aaKnown RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 ZNF335Q9H4Z2 1342 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 ABL1P00519 1130 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 KCNQ4P56696 695 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 PSMC1P62191 440 aaKnown RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 PDK4Q16654 411 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms