RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SIX4Q9UIU6 781 aa19.81■□□□□ 0.76
HOXA9-201ENST00000343483 POLIQ9UNA4 740 aa19.81■□□□□ 0.76
HOXA9-201ENST00000343483 GOLGA8KD6RF30 607 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 ITGB3P05106 788 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 BRD2P25440 801 aaKnown RBP19.8■□□□□ 0.76
HOXA9-201ENST00000343483 ACTN2P35609 894 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 LIN9Q5TKA1 542 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 MMS22LQ6ZRQ5 1243 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 FAM76AQ8TAV0 307 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 KAT2BQ92831 832 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 CD101Q93033 1021 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 MROH7Q68CQ1 1323 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 NRCAMQ92823 1304 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 ZSWIM8A7E2V4 1837 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 CTNNA1P35221 906 aaKnown RBP19.8■□□□□ 0.76
HOXA9-201ENST00000343483 PEX5P50542 639 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 ZSCAN26Q16670 478 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 SLC10A6Q3KNW5 377 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 WDR72Q3MJ13 1102 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 AMACRQ9UHK6 382 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 NR2E1Q9Y466 385 aa19.8■□□□□ 0.76
HOXA9-201ENST00000343483 GOLGA6L10A0A0M3HER8 536 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 A0A1B0GUA9 196 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 RGS2P41220 211 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 RAP1GAPP47736 663 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 HLTFQ14527 1009 aaKnown RBP eCLIP19.79■□□□□ 0.76
HOXA9-201ENST00000343483 MFSD10Q14728 455 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 KYAT1Q16773 422 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 ZNF667Q5HYK9 610 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 MREGQ8N565 214 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 USP6NLQ92738 828 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 ZIM3Q96PE6 472 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 ASB7Q9H672 318 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 TNPO2O14787 897 aaKnown RBP19.79■□□□□ 0.76
HOXA9-201ENST00000343483 SREBF2Q12772 1141 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 CUL1Q13616 776 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 CLUL1Q15846 466 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 CFAP58Q5T655 872 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 SEL1L2Q5TEA6 688 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 PHF13Q86YI8 300 aaPredicted RBP19.79■□□□□ 0.76
HOXA9-201ENST00000343483 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.79■□□□□ 0.76
HOXA9-201ENST00000343483 ACAP3Q96P50 834 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 ADAMTS10Q9H324 1103 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 SLITRK6Q9H5Y7 841 aa19.79■□□□□ 0.76
HOXA9-201ENST00000343483 MYO1FO00160 1098 aa19.78■□□□□ 0.76
HOXA9-201ENST00000343483 MYL3P08590 195 aa19.78■□□□□ 0.76
HOXA9-201ENST00000343483 CYP2C9P11712 490 aa19.78■□□□□ 0.76
HOXA9-201ENST00000343483 YWHAEP62258 255 aaKnown RBP19.78■□□□□ 0.76
HOXA9-201ENST00000343483 BEX3Q00994 111 aa19.78■□□□□ 0.76
HOXA9-201ENST00000343483 IRF5Q13568 498 aa19.78■□□□□ 0.76
HOXA9-201ENST00000343483 TMEM132DQ14C87 1099 aa19.78■□□□□ 0.76
HOXA9-201ENST00000343483 KCTD19Q17RG1 926 aaPredicted RBP19.78■□□□□ 0.76
HOXA9-201ENST00000343483 EIF1ADQ8N9N8 165 aaKnown RBP19.78■□□□□ 0.76
HOXA9-201ENST00000343483 CCDC26Q8TAB7 109 aa19.78■□□□□ 0.76
HOXA9-201ENST00000343483 APBA2Q99767 749 aa19.78■□□□□ 0.76
HOXA9-201ENST00000343483 BEGAINQ9BUH8 593 aa19.78■□□□□ 0.76
HOXA9-201ENST00000343483 GCOM2Q9BZD3 368 aaPredicted RBP19.78■□□□□ 0.76
HOXA9-201ENST00000343483 ZFYVE28Q9HCC9 887 aa19.78■□□□□ 0.76
HOXA9-201ENST00000343483 PCDHA3Q9Y5H8 950 aa19.78■□□□□ 0.76
HOXA9-201ENST00000343483 HTTP42858 3142 aa19.78■□□□□ 0.76
HOXA9-201ENST00000343483 CASP8AP2Q9UKL3 1982 aa19.77■□□□□ 0.76
HOXA9-201ENST00000343483 PYGMP11217 842 aa19.77■□□□□ 0.76
HOXA9-201ENST00000343483 CTNNA2P26232 953 aa19.77■□□□□ 0.76
HOXA9-201ENST00000343483 CPT1AP50416 773 aa19.77■□□□□ 0.76
HOXA9-201ENST00000343483 LBX1P52954 281 aa19.77■□□□□ 0.76
HOXA9-201ENST00000343483 RUFY4Q6ZNE9 571 aa19.77■□□□□ 0.76
HOXA9-201ENST00000343483 CATSPER4Q7RTX7 472 aa19.77■□□□□ 0.76
HOXA9-201ENST00000343483 VCPIP1Q96JH7 1222 aa19.77■□□□□ 0.76
HOXA9-201ENST00000343483 OSMRQ99650 979 aa19.77■□□□□ 0.76
HOXA9-201ENST00000343483 AP5M1Q9H0R1 490 aa19.77■□□□□ 0.76
HOXA9-201ENST00000343483 CDHR5Q9HBB8 845 aa19.77■□□□□ 0.76
HOXA9-201ENST00000343483 GPR32O75388 356 aa19.77■□□□□ 0.75
HOXA9-201ENST00000343483 CDH8P55286 799 aa19.77■□□□□ 0.75
HOXA9-201ENST00000343483 RWDD2BP57060 319 aa19.77■□□□□ 0.75
HOXA9-201ENST00000343483 INHBEP58166 350 aa19.77■□□□□ 0.75
HOXA9-201ENST00000343483 LACTBP83111 547 aaPredicted RBP19.77■□□□□ 0.75
HOXA9-201ENST00000343483 POU5F1Q01860 360 aaKnown RBP19.77■□□□□ 0.75
HOXA9-201ENST00000343483 C1QBPQ07021 282 aaKnown RBP19.77■□□□□ 0.75
HOXA9-201ENST00000343483 CRHR2Q13324 411 aa19.77■□□□□ 0.75
HOXA9-201ENST00000343483 MAMLD1Q13495 774 aa19.77■□□□□ 0.75
HOXA9-201ENST00000343483 PPP1R2P3Q6NXS1 205 aa19.77■□□□□ 0.75
HOXA9-201ENST00000343483 MAATS1Q7Z4T9 603 aa19.77■□□□□ 0.75
HOXA9-201ENST00000343483 IQCKQ8N0W5 287 aa19.77■□□□□ 0.75
HOXA9-201ENST00000343483 C1orf131Q8NDD1 294 aaKnown RBP19.77■□□□□ 0.75
HOXA9-201ENST00000343483 SOCS4Q8WXH5 440 aa19.77■□□□□ 0.75
HOXA9-201ENST00000343483 TFAP2BQ92481 460 aa19.77■□□□□ 0.75
HOXA9-201ENST00000343483 MRPL47Q9HD33 250 aaKnown RBP19.77■□□□□ 0.75
HOXA9-201ENST00000343483 ERVK-5Q9HDB9 667 aa19.77■□□□□ 0.75
HOXA9-201ENST00000343483 TTI1O43156 1089 aa19.76■□□□□ 0.75
HOXA9-201ENST00000343483 NPTXRO95502 500 aa19.76■□□□□ 0.75
HOXA9-201ENST00000343483 LSM8O95777 96 aaKnown RBP19.76■□□□□ 0.75
HOXA9-201ENST00000343483 POLR2BP30876 1174 aaKnown RBP19.76■□□□□ 0.75
HOXA9-201ENST00000343483 PSEN2P49810 448 aa19.76■□□□□ 0.75
HOXA9-201ENST00000343483 DDX42Q86XP3 938 aaKnown RBP eCLIP19.76■□□□□ 0.75
HOXA9-201ENST00000343483 CELF4Q9BZC1 486 aaKnown RBP19.76■□□□□ 0.75
HOXA9-201ENST00000343483 SMYD3Q9H7B4 428 aa19.76■□□□□ 0.75
HOXA9-201ENST00000343483 GJD2Q9UKL4 321 aa19.76■□□□□ 0.75
HOXA9-201ENST00000343483 SMIM35A0A1B0GVV1 85 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 MBLAC1A4D2B0 266 aaPredicted RBP19.75■□□□□ 0.75
HOXA9-201ENST00000343483 BHMG1C9JSJ3 638 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms